Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01120 ATGGCCAAGCATAGTTTTATTGTCACTTATGTTTCTTTCATTCTTGCATGCATATTTTCCCAGTCCTGTGAAGCTCTTGCTGAAAATCCAAAGCTTCATATTGTGTATATGGGTACCCTTCCAAAGAGACCTTATTCACCGACCTCTCACCATCTTAGCATGTTGCAACAAGTCTTTGATGGCAACAATTCAATAAGTTCCCTCATTCATAGTTATAAGAGAAGCTTTAATGGGTTCGCTGCTATGCTAAGCGATCAACAAAGGGACAAGCTAACTCAGATGGAAGGTGTTATCTCAGTTTTCCCGAGCAAAACTCTTCAAACACAAACAACAAAATCTTGGGACTTCATGGGGTTTCCTCAGCCAGTCAAACGCAACCATACTATTGAGAGTGATATGGTGATTGGAGTTTTTGACACAGGAATTTGGCCAGAATCAAAGAGTTTCAGTGATCATGGTTTTGGTCCCATTCCTAAAAAGTGGAAGGGTACCTGTGCAGGTGGCAAATATTTCACTTGCAACAAGAAGATTATTGGTGCAAGGTTTTATGGTGATGGTTCTGCTAGAGACTTTGTTGGCCACGGAACCCATACTGCATCAACAGCAGCAGGAAACCAAGTTAACAACGTGAGCTTTTATGGACTTGCACAGGGCACTGCAAGAGGAGGGGTTCCATCAGCAAGAGTTGCCATGTATAAAGTATGTGCTGAACGATGCACGGAAGCTAATATATTGGCTGCTTTTGATGATGCTATAGCAGATGGAGTTGACATCATTTCCATTTCATTAGGATCCAACATTGCATTCAACTTTGAGAATGATGTTATTGCAATTGGTTCATTTCAAGCTATGGCAAAAGGGATTCTCACGGTGCATTCTGCAGGTAATAGTGGCCCTGATCCAGGTACAGTCGCAAGTGTAGCACCATGGATGCTATCTGTTGCAGCAAGTACCATAGATCGTCAATTCATTAGCAAGCTAATTCTTGGGAATGGAAAAACACTAATTGGGAAATCAATAAACTCTTTCACATCAAATGGAACAAAATTTACCCTTGCTAAGTTGTTTGGTGATTATGATGATAAACTTGAGTTCGTGAATGGAAAGATAGCTTTATGTGATTATGCTAATGAGGAAGATGTAGCCCATGCTGAAGGGGCAATTGGTGCAATCAATGGGAAATCCACTAAGGGTTTTACACCCGAAGTCACTATAATACCTTCTGTGGCGTTGGATTCCTATGATTATGCTCTCGTGGAATTCTACAAAAATTCAACAAAAGATCCAAAAGGCGAAATACTCAAGAGTGAGATAATTGGAGATCATACAGCCCCTACTATTGCTGAGTTCTCTTCACGTGGACCAAATGTCATAGTTCTAGAAATTCTGAAACCAGATATCAGTGCCCCTGGAGTAGAAATATTGGCTGCATATTCACCCATGGCTTCACCTTCACAGAATCCTGAAGACAAAAGATCTGTCAAATACAACATATTATCCGGAACATCAATGTCATGTCCTCATGTTGCTGGAATAGCTGCATATGTGAAATCTTTTCACTTGGATTGGTCACCAGCAGCTATCAAATCTGGGATTATGACATCAGCACAACTCATGAATGGTTCTAAGGATCAAATCGGTGAATATGCTTATGGATCAGGGCATGTCAATCCTGTGCAAGCTATTAATCCTGGCCTTATTTATGACATTGGTAAGGAGGATTATATACAAATGCTCTGCAATTTGGGTTACAGTAATGAAAAGATAAAGAAAATATCTGGTGAAAATATCCATTGCTTTGGAGCATCTGATAGATCCTTAGTAAGAAATCTTAACTATCCTGCACTTGCAATTCAAGTTCAGCCTGAGGCATCTTTCAATGTAAGGTTTAATAGAACAGTCACAAATGTTGGGTTAGCAAACTCAAATTACAAGGCAACTATCTTGCCTAATCCACAAATCAACATTACAGTGACACCTGAGATTTTGTCCTTCAAATCATTGAACGAGAAGCAGTCTTTTGTTGTCAGCATCATTGGTGGTCATTTTCCAAATAAGATTGTCCTTAGCTCACAACTAATATGGTCAGATGGTAGCCACATTGTACGGAGTCCAATTGTTGTGAATGTTTCTAGTAAGAAATTATAA 2148 0.3971 MAKHSFIVTYVSFILACIFSQSCEALAENPKLHIVYMGTLPKRPYSPTSHHLSMLQQVFDGNNSISSLIHSYKRSFNGFAAMLSDQQRDKLTQMEGVISVFPSKTLQTQTTKSWDFMGFPQPVKRNHTIESDMVIGVFDTGIWPESKSFSDHGFGPIPKKWKGTCAGGKYFTCNKKIIGARFYGDGSARDFVGHGTHTASTAAGNQVNNVSFYGLAQGTARGGVPSARVAMYKVCAERCTEANILAAFDDAIADGVDIISISLGSNIAFNFENDVIAIGSFQAMAKGILTVHSAGNSGPDPGTVASVAPWMLSVAASTIDRQFISKLILGNGKTLIGKSINSFTSNGTKFTLAKLFGDYDDKLEFVNGKIALCDYANEEDVAHAEGAIGAINGKSTKGFTPEVTIIPSVALDSYDYALVEFYKNSTKDPKGEILKSEIIGDHTAPTIAEFSSRGPNVIVLEILKPDISAPGVEILAAYSPMASPSQNPEDKRSVKYNILSGTSMSCPHVAGIAAYVKSFHLDWSPAAIKSGIMTSAQLMNGSKDQIGEYAYGSGHVNPVQAINPGLIYDIGKEDYIQMLCNLGYSNEKIKKISGENIHCFGASDRSLVRNLNYPALAIQVQPEASFNVRFNRTVTNVGLANSNYKATILPNPQINITVTPEILSFKSLNEKQSFVVSIIGGHFPNKIVLSSQLIWSDGSHIVRSPIVVNVSSKKL* 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01120 715 FunFam Subtilisin-like protease SBT1.5 132 329 - -
Rops4g01120 715 ProSitePatterns Serine proteases, subtilase family, serine active site. 501 511 IPR023828 -
Rops4g01120 715 Gene3D - 320 440 - -
Rops4g01120 715 ProSiteProfiles Serine proteases, subtilase domain profile. 113 562 - -
Rops4g01120 715 Pfam Fibronectin type-III domain 610 708 IPR041469 -
Rops4g01120 715 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 34 708 IPR045051 -
Rops4g01120 715 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 108 IPR037045 -
Rops4g01120 715 Pfam Subtilase family 131 554 IPR000209 GO:0006508|GO:0008236
Rops4g01120 715 SUPERFAMILY Subtilisin-like 114 566 IPR036852 GO:0004252|GO:0006508
Rops4g01120 715 Gene3D Peptidase S8/S53 domain 132 575 IPR036852 GO:0004252|GO:0006508
Rops4g01120 715 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Rops4g01120 715 Pfam Peptidase inhibitor I9 33 108 IPR010259 -
Rops4g01120 715 Gene3D - 579 711 - -
Rops4g01120 715 CDD PA_subtilisin_like 327 433 - -
Rops4g01120 715 CDD Peptidases_S8_3 106 536 IPR034197 -
Rops4g01120 715 PRINTS Subtilisin serine protease family (S8) signature 500 516 IPR015500 -
Rops4g01120 715 PRINTS Subtilisin serine protease family (S8) signature 130 149 IPR015500 -
Rops4g01120 715 PRINTS Subtilisin serine protease family (S8) signature 190 203 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01120 Rops-Chr4 30390205 30392352 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01120 7 710 Subtilisin-like Serine Gene Family AT5G58830 52.705 0.0 749
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01120 - - psat:127076787 840.876