Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01119 ATGGCCTTGCAAAGGTATCTCTCTGTTGTCCTCCATGCCTTTGTGTTTGCAGCTGTTGCTAACACAGCATTTTCACAATTGTCACCAAATTACTATGAATACACTTGCCCTAACGCTTTGAGCACCATCAGAAGTGTCGTGTTTGCTTCCCTGCAGAAAGAAGCCCGTATGGGTGCTGCATTGCTACGCTTGCACTTCCATGATTGTTTCGTTAACGGTTGTGATGATTCAATTCTTTTAGACTCCACACCCTATATTGATAGCGAAAAGAATGCATTACCTAATGCCAACTCTGTTCGAGGATTTGAAGTAATCGATGCGATCAAGCAGGCAGTGGACGAAGCATGTGGAAAACCTGTTGCAGCTCAAGACTCTGTCGTTGCGTTACCATGTCAAATAGAGCAGGTGCCTGATGGCATAATACGATAA 429 0.4429 MALQRYLSVVLHAFVFAAVANTAFSQLSPNYYEYTCPNALSTIRSVVFASLQKEARMGAALLRLHFHDCFVNGCDDSILLDSTPYIDSEKNALPNANSVRGFEVIDAIKQAVDEACGKPVAAQDSVVALPCQIEQVPDGIIR* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01119 142 SUPERFAMILY Heme-dependent peroxidases 26 137 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops4g01119 142 Gene3D - 27 133 - -
Rops4g01119 142 PANTHER PEROXIDASE 72-RELATED 22 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g01119 142 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g01119 142 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g01119 142 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g01119 142 ProSiteProfiles Plant heme peroxidase family profile. 26 127 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops4g01119 142 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Rops4g01119 142 Pfam Peroxidase 44 126 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01119 Rops-Chr4 30371047 30371878 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01119 25 129 Peroxidase AT5G05340 55.752 4.70e-38 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01119 K00430 - gmx:100812820 184.111