Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01118 ATGGCTAAGCATAATTTTATTGTCACTTATGTTTCTTTCGTTCTTGTATGCATATTTTCTCAGTCGTATGAAGCTATTGCTGAAAATCCAAAGCTTCATATTGTGTATATGGGCTCCCTTCCAAAGAGACCTTATTCACCAACCTCTCACCATCTCAGCATGCTGCAACAAGTCTTTGATGGCAACAATTCAACAAGTTTCCTCATTCATAGTTACAAGAGAAGCTTTAATGGGTTTGCTGCCATGCTAAGCAATCAACAAAGGGACAAGCTAACTCAGATGGGAGGTGTTATCTCAGTGTTCCCGAGTAAAACTCTTCAAACACAAACTACAAAATCTTGGGACTTTATGGGGTTTCATCAGTTAGTCAAACGCAGCCACACTACTGAGAGTGATATGGTGATTGGAGTTTTTGACACTGGGATTTGGCCAGAATCAGAAAGTTTCAGTGATCAAGGTTTCGGTCCCATTCCCAAAAAGTGGAAGGGTACTTGTGTAGGTGGCAAGTACTTCACATGCAACAAGAAGATTATTGGAGCAAGGTTTTATGGTGATGGTTCTGCCAGAGACTTTGATGGCCATGGAACCCATACTACATCAACAGCAGCAGGAAACCAAGTTAACAATGTGAGCTTTTATGGACTTGCACAAGGCACTGCAAGAGGAGGAGTTCCATCAGCAAGAGTTGCCATATACAAAGTATGTGCTAAAAAATGTACGGAAGCTAATATATTGGCTGCTTTTGATGATGCCATAGCAGATGGTGTTGACATCATTTCAATTTCATTAGGGACCAATATTGCATTAGACTTTGAGAATGATGCTATTGCAATTGGTTCATTTCATGCTATGGGAAAAGGGATTCTCACGGTGCAGTCTGCAGGTAATAATGGCCCTATTCCAGGCACAGTCGCAAGTGTAGCACCATGGATGCTATCTGTTGCAGCAAGTACCATAGATCGTCAATTCATTACCAAACTAGTTCTTGGGAATGGAAAAACACTAATTGGGAAATCGATAAACTCTTTCACATCAAATGGAACAAAATTTCCCCTTGCTAAGCTGTATGGTGATTATGATGATAATCTCGAGTTTGTGAAAGGAAAGATAGCTTTATGTGGTTATGATGATGAAGATGAAGCTCAATCTCAAGGGGCAATTGGTGCAATCAGAGGGAAACCCACTGAGGGTTTTACACCCGAAGTTGCTATAATACCTTCTGTGGAGTTGGATTCCTATGACTATGATCTTGTGGAATCCTACAAAAATTCAACAAAAGATCCAAAAGGTGAAATATTCAAGAGTGAGATAATTGAAGATCATATAGCCCCTACTGTTGCTGAGTTTTCTTCACGTGGACCAAATGTCAAAGTTCCAGAAATCTTGAAACCAGACATCAGTGCCCCTGGAGTACAAATATTGGCTGCATATTCACCTATGGCTTCACCGTCACAAAATCCTAAAGATGAAAGATCTGTCAAATACAATATAATATCTGGAACATCTATGTCATGTCCCCATGTTGCTGGAATAGCTGCATATGTGAAATCTTTTCATTTGGATTGGTCACCAACAGCCATTAAATCTGCGATTATGACTTCAGCACAACGCATGAATGGTTCGAAGGATCAAATCGGTGAATATGCTTATGGATCAGGGCATGTCAATCCTGTACAAGCCATTAATCCTGGCCTTATTTATGACATTGGTAAGGAGGATTATATACAAATGCTTTGCAATTTGGGATACAGTAATGAAAAGATAAAAAAAATAATTGGTGAAAATATCCATTGCTTTGGAGAACCTGATAGATCCTTAGTAAGAAATCTTAATTATCCTGCACTTGCAATTCAAGTTCAGCCTGAGGCGTCTTTCAATGTAAGGTTTAATAGAACAGTCACAAACGTTGGGTTAGCAAACTCAAATTACAAGGCAACTATCTTCCCCAATCCACAAATCAACATTACAGTGGCACCTGAGATTTTGTCCTTCAAATCATTGAACGAGAAGCAGTCTTTTGTTGTCAGTATCATTGGTGGTCATATTCCAAATAAAACTGTGTTGAGCTCACAACTAATATGGTCAGATGGCAACCACATTGTGCGAAGTCCAATTGTTGTGGATGTTTCTAGTTAG 2136 0.3947 MAKHNFIVTYVSFVLVCIFSQSYEAIAENPKLHIVYMGSLPKRPYSPTSHHLSMLQQVFDGNNSTSFLIHSYKRSFNGFAAMLSNQQRDKLTQMGGVISVFPSKTLQTQTTKSWDFMGFHQLVKRSHTTESDMVIGVFDTGIWPESESFSDQGFGPIPKKWKGTCVGGKYFTCNKKIIGARFYGDGSARDFDGHGTHTTSTAAGNQVNNVSFYGLAQGTARGGVPSARVAIYKVCAKKCTEANILAAFDDAIADGVDIISISLGTNIALDFENDAIAIGSFHAMGKGILTVQSAGNNGPIPGTVASVAPWMLSVAASTIDRQFITKLVLGNGKTLIGKSINSFTSNGTKFPLAKLYGDYDDNLEFVKGKIALCGYDDEDEAQSQGAIGAIRGKPTEGFTPEVAIIPSVELDSYDYDLVESYKNSTKDPKGEIFKSEIIEDHIAPTVAEFSSRGPNVKVPEILKPDISAPGVQILAAYSPMASPSQNPKDERSVKYNIISGTSMSCPHVAGIAAYVKSFHLDWSPTAIKSAIMTSAQRMNGSKDQIGEYAYGSGHVNPVQAINPGLIYDIGKEDYIQMLCNLGYSNEKIKKIIGENIHCFGEPDRSLVRNLNYPALAIQVQPEASFNVRFNRTVTNVGLANSNYKATIFPNPQINITVAPEILSFKSLNEKQSFVVSIIGGHIPNKTVLSSQLIWSDGNHIVRSPIVVDVSS* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01118 711 SUPERFAMILY Subtilisin-like 113 565 IPR036852 GO:0004252|GO:0006508
Rops4g01118 711 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 108 IPR037045 -
Rops4g01118 711 ProSiteProfiles Serine proteases, subtilase domain profile. 113 561 - -
Rops4g01118 711 Gene3D - 320 439 - -
Rops4g01118 711 FunFam Subtilisin-like protease SBT1.5 132 330 - -
Rops4g01118 711 Pfam Peptidase inhibitor I9 33 108 IPR010259 -
Rops4g01118 711 Gene3D - 578 710 - -
Rops4g01118 711 Pfam Subtilase family 131 553 IPR000209 GO:0006508|GO:0008236
Rops4g01118 711 CDD PA_subtilisin_like 327 432 - -
Rops4g01118 711 Gene3D Peptidase S8/S53 domain 132 574 IPR036852 GO:0004252|GO:0006508
Rops4g01118 711 CDD Peptidases_S8_3 106 535 IPR034197 -
Rops4g01118 711 ProSitePatterns Serine proteases, subtilase family, serine active site. 500 510 IPR023828 -
Rops4g01118 711 Pfam Fibronectin type-III domain 609 707 IPR041469 -
Rops4g01118 711 PRINTS Subtilisin serine protease family (S8) signature 190 203 IPR015500 -
Rops4g01118 711 PRINTS Subtilisin serine protease family (S8) signature 499 515 IPR015500 -
Rops4g01118 711 PRINTS Subtilisin serine protease family (S8) signature 130 149 IPR015500 -
Rops4g01118 711 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 34 707 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01118 Rops-Chr4 30351389 30353524 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01118 15 707 Subtilisin-like Serine Gene Family AT5G58830 53.617 0.0 747
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01118 - - psat:127076787 825.083