Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01115 ATGGTAGAAATGGCCTCTAATGGTTATTTCTATGTTGTCCTCCATGCCTTGGTGTTTGCAGCTCTTGCAACCACAGCATTCTCTGCAGTCTCACCAAATTACTATGACTACACGTGCCCTAATGCTTTGAGCACCGTTAAAAGAGTGGTGGAGGCTGCTGTACACAAAGAGCGTCGTATGGGTGCTTCTTTGTTACGCTTGCACTTCCATGATTGCTTTGTTAATGGTTGCGATGGATCAATTCTACTGGACTCTACATCCTCCATTGACAGCGAAAAGAATTCAAATGCTAATTTCCAATCTGCTCGAGGATTTGAAGTGGTGGATGAGATCAAGCAAGCAGTGGACGAAGCATGTGGAAAACCTGTTGTTTCTTGCGCAGACATATTGGCTGTTGCTGCTCGAGATTCTGTGGTTGCGGTGAGTAACTACTAG 435 0.4506 MVEMASNGYFYVVLHALVFAALATTAFSAVSPNYYDYTCPNALSTVKRVVEAAVHKERRMGASLLRLHFHDCFVNGCDGSILLDSTSSIDSEKNSNANFQSARGFEVVDEIKQAVDEACGKPVVSCADILAVAARDSVVAVSNY* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01115 144 Gene3D - 30 144 - -
Rops4g01115 144 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
Rops4g01115 144 PANTHER PEROXIDASE 72-RELATED 29 140 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g01115 144 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops4g01115 144 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops4g01115 144 ProSiteProfiles Plant heme peroxidase family profile. 29 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops4g01115 144 SUPERFAMILY Heme-dependent peroxidases 31 141 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops4g01115 144 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g01115 144 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g01115 144 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g01115 144 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g01115 144 Pfam Peroxidase 46 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01115 Rops-Chr4 30316597 30317570 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01115 30 141 Peroxidase AT5G05340 65.179 5.22e-46 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01115 K00430 - gmx:100814067 207.994