Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01114 ATGGCTGGAATTTCTCATTCTAGAGTGACTTTTCCTGACTTCAAGCTTAGAATCTTTTTATTGACATGTCTTATTGGGATTGTCTCATCAGCTTCAGATTCTGCTAGTCAGTTAAGCCCTGTTTTTTATGCTACAGAGTGTCCCCTGGCCCTTCTTACCATCAAGAAAGCTGTAACCGCTGCTGTGTGGGATGACCCTCGCATGGGTGCATCCTTGCTTCGTCTTCACTTCCATGACTGCTTTGTCCAAGGATGCGATGCATCAGTATTGTTGAAGGACACAGAAACTTTCAAGGGCGAACAAAGTGCCTTTCCCAATGCTAATTCTCTAAGGGGTTTCGATGTCATAGACAACATAAAAGCTGAAATTGAGACATTGTGCCCTGGTGTTGTCTCTTGTGCCGACATCCTTGCCGTTGCTGCAAGGGATTCTGTTGTTGCTCTTGGTGGAACTGGTTGGTTGGTTCGCTTGGGTAGAAGAGACTCTACAAGTGCAAGTTTAAGTGCTGCTAACTCAGATTTACCATCTCCCTTTCTTGATCTTAATGGCCTTATCGCTGCTTTCAAAAAGAAGGATTTCACAGTCGATGAAATGGTTGCTTTATCAGGTGCTCACACAATAGGCATAGCAAGATGTTCATCCTTCCGAACAAGGATTTACAACGAAAGCAATATAGATCCCTCGTATGCAAAATCATTGCAAGCATATTGTCCCAGTAATGGTGGTGATAACAACCCATCTCCTTTAGACTCCACCACTCCAAACTTTTTTGACAGTGCTTATTACAGGAATTTAATGTACAAAAAGGGTCTTTTGCACTCTGATCAACAGCTTTTTAACGGTGGTTCCACGGACTCTAAAGTTTCGGACTACGCCAATAACCCATTACTCTTCAGATTAGATTTTGCAAACGCGATGATCAAGATGGGCAGCATTAGCCCTCTAACTGGCTACCAGGGTCAGATCAGAAAAGTATGCAGCAGAGTGAATTGA 993 0.432 MAGISHSRVTFPDFKLRIFLLTCLIGIVSSASDSASQLSPVFYATECPLALLTIKKAVTAAVWDDPRMGASLLRLHFHDCFVQGCDASVLLKDTETFKGEQSAFPNANSLRGFDVIDNIKAEIETLCPGVVSCADILAVAARDSVVALGGTGWLVRLGRRDSTSASLSAANSDLPSPFLDLNGLIAAFKKKDFTVDEMVALSGAHTIGIARCSSFRTRIYNESNIDPSYAKSLQAYCPSNGGDNNPSPLDSTTPNFFDSAYYRNLMYKKGLLHSDQQLFNGGSTDSKVSDYANNPLLFRLDFANAMIKMGSISPLTGYQGQIRKVCSRVN* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01114 330 Gene3D Peroxidase, domain 2 175 309 - -
Rops4g01114 330 PRINTS Haem peroxidase superfamily signature 131 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops4g01114 330 PRINTS Haem peroxidase superfamily signature 250 265 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops4g01114 330 PRINTS Haem peroxidase superfamily signature 69 83 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops4g01114 330 PRINTS Haem peroxidase superfamily signature 197 212 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops4g01114 330 PRINTS Haem peroxidase superfamily signature 149 161 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops4g01114 330 FunFam Peroxidase 41 182 - -
Rops4g01114 330 PRINTS Plant peroxidase signature 71 91 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g01114 330 PRINTS Plant peroxidase signature 248 263 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g01114 330 PRINTS Plant peroxidase signature 304 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g01114 330 PRINTS Plant peroxidase signature 196 208 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g01114 330 PRINTS Plant peroxidase signature 47 66 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g01114 330 PRINTS Plant peroxidase signature 264 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g01114 330 PRINTS Plant peroxidase signature 149 164 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g01114 330 PRINTS Plant peroxidase signature 111 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g01114 330 PRINTS Plant peroxidase signature 130 140 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g01114 330 ProSitePatterns Peroxidases proximal heme-ligand signature. 197 207 IPR019793 -
Rops4g01114 330 Gene3D - 42 327 - -
Rops4g01114 330 FunFam Peroxidase 175 309 - -
Rops4g01114 330 PANTHER PEROXIDASE 72-RELATED 35 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g01114 330 SUPERFAMILY Heme-dependent peroxidases 37 330 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops4g01114 330 ProSiteProfiles Plant heme peroxidase family profile. 37 330 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops4g01114 330 CDD secretory_peroxidase 37 329 IPR033905 GO:0004601|GO:0042744
Rops4g01114 330 Pfam Peroxidase 55 294 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops4g01114 330 ProSitePatterns Peroxidases active site signature. 69 80 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01114 Rops-Chr4 30300133 30302773 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01114 36 330 Peroxidase AT5G05340 60.606 1.48e-130 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01114 K00430 - gmx:100811432 443.736