Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01113 ATGTCTAGAATTTCTCATTCCAGGATGATTTTTCCTAACTTCAAACTCAGAATCCTATTATTCATATGTCTTGTTGGGATTGCCTCATCAACTTCAGATCTAATTTCTTCAGCAGCTACTGCTGTGTCTTCAGCTATACCTGATCCTACTAGTCAGTTAAGCCCCAGTTTTTATATTACAAAGTGTCCCCTAGCCCTTCTCACCATCAAGTTAGCAGTAACCTCTGCTGTGTTGAAAGAGCCTCGCATGGGTGCATCCTTGCTTCGTCTTCATTTCCATGACTGCTTTGTCCAAGGGTGTGATGCATCAGTATTGTTAAAGGACACAGCAACATTCAAGGGCGAACAAAGTGCCTTTCCCAATGTTAATTCTCTAAGGGGATTCGACGTCATAGACGACATAAAAGCTAAACTAGAGAGATTGTGCCCTGGTGTTGTCTCTTGCGCCGACATCGTTGCCGTTGCTGCAAGGGATTCTGTTTTTGCTCTTGGTGGACCTCGTTGGGAAGTTCCCTTGGGCAGAAGAGACTCAACAACTGCAAGTTTTAGTGCTGCTAACTCAGATTTACCATCTCCCTTTCTTGATCTTAGTGGACTTATAGCAGCTTTCAAAAAGAAGAAATTCACTGTCGATGAAATGGTTGCTTTATCAGGTGCTCACTCAATAGGCAAAGCCAAATGTTCACTCTTCCGAACAAGGATTTACAACGAAAGCAATATAGATCGCTGGTATGCAAAATCATTGCAAGCAAATTGTCCAAGGATTGGTGGTGATAACAATTTATCTCCTTTAGACTCCACCACTCCAAACTTTTTCGACAGTGCTTATTACAGGAATTTAATGTACAAAAAGGGTCTTCTGCACTCTGATCAACAGCTTTATAACGGCGGTTCCACAGACCAAAAAGTTTCAGATTACGCCAAGAACCCATTACTCTTCAGATTAGATTTTGCCAATGCGATGATCAAGATGAGCAACCTTAGTCCACTAACCGGCAACCAGGGTCAGATCAGAAAAGTATGCAGCAGAGTTAATTGA 1038 0.421 MSRISHSRMIFPNFKLRILLFICLVGIASSTSDLISSAATAVSSAIPDPTSQLSPSFYITKCPLALLTIKLAVTSAVLKEPRMGASLLRLHFHDCFVQGCDASVLLKDTATFKGEQSAFPNVNSLRGFDVIDDIKAKLERLCPGVVSCADIVAVAARDSVFALGGPRWEVPLGRRDSTTASFSAANSDLPSPFLDLSGLIAAFKKKKFTVDEMVALSGAHSIGKAKCSLFRTRIYNESNIDRWYAKSLQANCPRIGGDNNLSPLDSTTPNFFDSAYYRNLMYKKGLLHSDQQLYNGGSTDQKVSDYAKNPLLFRLDFANAMIKMSNLSPLTGNQGQIRKVCSRVN* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01113 345 FunFam Peroxidase 190 324 - -
Rops4g01113 345 PRINTS Haem peroxidase superfamily signature 146 163 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops4g01113 345 PRINTS Haem peroxidase superfamily signature 212 227 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops4g01113 345 PRINTS Haem peroxidase superfamily signature 265 280 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops4g01113 345 PRINTS Haem peroxidase superfamily signature 84 98 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops4g01113 345 PRINTS Haem peroxidase superfamily signature 164 176 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops4g01113 345 ProSitePatterns Peroxidases active site signature. 84 95 IPR019794 GO:0004601
Rops4g01113 345 SUPERFAMILY Heme-dependent peroxidases 52 345 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops4g01113 345 PANTHER PEROXIDASE 72-RELATED 51 344 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g01113 345 Pfam Peroxidase 73 309 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops4g01113 345 ProSitePatterns Peroxidases proximal heme-ligand signature. 212 222 IPR019793 -
Rops4g01113 345 CDD secretory_peroxidase 52 344 IPR033905 GO:0004601|GO:0042744
Rops4g01113 345 Gene3D Peroxidase, domain 2 190 324 - -
Rops4g01113 345 FunFam Peroxidase 56 196 - -
Rops4g01113 345 PRINTS Plant peroxidase signature 211 223 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g01113 345 PRINTS Plant peroxidase signature 62 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g01113 345 PRINTS Plant peroxidase signature 86 106 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g01113 345 PRINTS Plant peroxidase signature 126 139 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g01113 345 PRINTS Plant peroxidase signature 319 332 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g01113 345 PRINTS Plant peroxidase signature 263 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g01113 345 PRINTS Plant peroxidase signature 145 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g01113 345 PRINTS Plant peroxidase signature 164 179 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g01113 345 PRINTS Plant peroxidase signature 279 296 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g01113 345 Gene3D - 57 342 - -
Rops4g01113 345 ProSiteProfiles Plant heme peroxidase family profile. 52 345 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01113 Rops-Chr4 30263255 30266597 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01113 51 345 Peroxidase AT5G05340 59.259 4.01e-130 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01113 K00430 - gmx:100811432 446.432