Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01085 ATGGGAGGGTGTTGCAGTTGCCACGTTTCAATTGGAGACAAGGTGCATGTTGAGGAATATGAATGTAACCATATCAATGATAATGCATGTGAACATGGTGGGGCCCGGGTCATGTTAAGAGGATCATCTAAGTTTGCATCAATGTACAGCCAAAAGGGTACAAAAGGAGTTAATCAAGATGCATTGACAGTTTGGGAGGACTTTGCTGGAGAAAAAGACATGATCTTTTGTGGTGTGTTCGATGGGCATGGTCCTCTAGGACACAAGTTTGCACACCATGTACGTAACAATCTACCCTCCAAACTCTCTGAAGCAATCAAACTGCAACAACAAAAGGTCTGCAAACACCATGGTGCTAATGTTGCAGACACAGGCAGTGATGAAGATGTCCATAGTAAGGATAAACAACACTTGTCCTTTGCTTCATGGGAGGGAAGCTTTTTGAGGTCCTTCAATGAAATGGATGAAGACCTTGCTAAGAACATTGACACTGATGGCTTTTGTGGAGGTAGCACTGCTGTAACTGTTATTAAACAGGGTGATCAGCTAATAGTTGGAAATTTGGGGGATTCTCGTGCAGTTCTTGGCACTAGAGCAGATGACAATCATCTTATTCCTGTTCCACTTACTGTTGACTTGAACCCTGATGTTCCAAGTGAAGCTTCAAGAATCATTAATTGTGGAGGTAGAGTTTTTGCAGCAGAAGTAGATCCGGGTGTAAACAGAATATGGAGGCCTGAAGGTACCAGCCCTGGACTAGCTATGTCAAGAGCCTTTGGAGATTTTTGCCTAAAAGACTATGGCCTCTCCTCAGTTCCTGACATATCTTATAGAAAACTTACCAACCAGGATGAATTTGTAGTTTTGGCCACTGATGGGATATGGGATGTGCTAACAAACAATGAAGTAATAGACATAGTTGCTTCAGCACCAAAGAGGTCTATGGCAGCCAAATTGTTAGTAAAGCGTGCTGTTCAGGCTTGGAGATACAAGAATCCTTATTTCCATGTTGATGATTGTGCAGCCATATGCTTGTTCCTGAATGATCAACCTGTTTTTACCCATTCCCAGTCCAAAGTGAGAGGGAACAATAGACATCAGAGGAAGCACCGGCATAGCTTTTGA 1125 0.4284 MGGCCSCHVSIGDKVHVEEYECNHINDNACEHGGARVMLRGSSKFASMYSQKGTKGVNQDALTVWEDFAGEKDMIFCGVFDGHGPLGHKFAHHVRNNLPSKLSEAIKLQQQKVCKHHGANVADTGSDEDVHSKDKQHLSFASWEGSFLRSFNEMDEDLAKNIDTDGFCGGSTAVTVIKQGDQLIVGNLGDSRAVLGTRADDNHLIPVPLTVDLNPDVPSEASRIINCGGRVFAAEVDPGVNRIWRPEGTSPGLAMSRAFGDFCLKDYGLSSVPDISYRKLTNQDEFVVLATDGIWDVLTNNEVIDIVASAPKRSMAAKLLVKRAVQAWRYKNPYFHVDDCAAICLFLNDQPVFTHSQSKVRGNNRHQRKHRHSF* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01085 374 Pfam Protein phosphatase 2C 91 325 IPR001932 -
Rops4g01085 374 SMART PP2C_4 36 345 IPR001932 -
Rops4g01085 374 CDD PP2Cc 45 347 IPR001932 -
Rops4g01085 374 ProSiteProfiles PPM-type phosphatase domain profile. 45 347 IPR001932 -
Rops4g01085 374 SUPERFAMILY PP2C-like 42 349 IPR036457 -
Rops4g01085 374 Gene3D - 40 349 IPR036457 -
Rops4g01085 374 PANTHER PROTEIN PHOSPHATASE 44 345 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01085 Rops-Chr4 29280329 29282477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01085 36 349 PP2C-type Phosphatase Gene Family AT1G16220 50.926 2.47e-115 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01085 - - cam:101501265 522.702