Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01070 ATGAATATCTTTATAGCAGGGACAGACACGGTTTCAGCAATAGTAGTTTGGGCTATGACTGCATTGTTGAAGAATCCTAGAATGATGAATAAAGTTCAAGGAGAAATTAGAGACTTATTTGGTGACAAAGATTTTATAAATAAAGAAGATATTCAAAGGCTTCCTTATCTTGAAGCAGTGGTGAAGGAGATTTTAAGACTGTTTCCACCATCATCTTTACTTTTGCATGGGCTTTAG 237 0.3502 MNIFIAGTDTVSAIVVWAMTALLKNPRMMNKVQGEIRDLFGDKDFINKEDIQRLPYLEAVVKEILRLFPPSSLLLHGL* 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01070 78 Pfam Cytochrome P450 1 75 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01070 78 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 75 - -
Rops4g01070 78 PRINTS P450 superfamily signature 6 23 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01070 78 PRINTS P450 superfamily signature 59 70 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01070 78 SUPERFAMILY Cytochrome P450 1 75 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01070 78 Gene3D Cytochrome P450 1 78 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01070 78 PRINTS E-class P450 group I signature 58 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01070 78 PRINTS E-class P450 group I signature 15 41 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01070 Rops-Chr4 29057140 29057453 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01070 1 76 Cytochrome P450 AT4G31500 53.947 2.24e-23 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01070 - - gmx:606704 120.938