Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01023 ATGGAAGTGATAGCCGTGTGTTGTGTTTTGGTTGTGCTTGAAGGGTTACCCCTCTCCTCGGATGCACAGCTAGATAACTCGTTTTATAGGGATTCATGTCCCAACATGCATTCAATTGTACGTGACGTGGTTACTAAGGTTTCAAAATCAGATCCCCGTATGCTTGCAAGTCTCGTCAGACTCCACTTTCACGACTGTTCCATTCAAGGCTGTGATGCATCGATTTTGCTGAACGACACCGCTACTATCGTGAGTGAGCAAGGAGCTTTTCCAAATAACAACTCAACAGGAGGTTTGGATATGGTGAACCAGATCGAGACAGTAGTGGAAGATGCTTGTCCTAACACAATTTCTTGTGCTGATATTCTTGCACTTGCTGATGAGATATCTTCTGCTCCGGCTCATGGTCCTGACTGGAAAGTTCCATTGGGAAGAAGGGACAGTTTAACAGCAAACTGA 459 0.451 MEVIAVCCVLVVLEGLPLSSDAQLDNSFYRDSCPNMHSIVRDVVTKVSKSDPRMLASLVRLHFHDCSIQGCDASILLNDTATIVSEQGAFPNNNSTGGLDMVNQIETVVEDACPNTISCADILALADEISSAPAHGPDWKVPLGRRDSLTAN* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01023 152 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g01023 152 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g01023 152 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g01023 152 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g01023 152 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g01023 152 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops4g01023 152 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops4g01023 152 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops4g01023 152 ProSiteProfiles Plant heme peroxidase family profile. 23 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops4g01023 152 PANTHER PEROXIDASE 72-RELATED 21 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g01023 152 SUPERFAMILY Heme-dependent peroxidases 23 151 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops4g01023 152 Gene3D - 24 152 - -
Rops4g01023 152 Pfam Peroxidase 40 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01023 Rops-Chr4 27774586 27775044 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01023 6 152 Peroxidase AT5G06720 51.701 9.65e-51 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01023 K00430 - gmx:111064645 246.128