Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01013 ATGGACTACTTGAAATTTATCCCACTACTTTCCTTTCTATATGCATGCATTCATATCCTGTTCTTTGGCCTTAACAGGAAAAACACAAAATCTCCCAAGCTCCCACCAAGTCCTCCTTGTTATCCCATCATAGGAAACATATTGCAACTTTGCCCAACAAAACTGCACCAATCACTTAGTAAACTCTCCAAAACATATGGACCTATCATGACTGTCAAGATAGGTACTATTACCACTGTGGTCATTTCATCTCCAAGTTTGGCCAAAGAAGCACTTCATAAAAATGACCAAGCCTTATCTAGCCGATTGATACCACACGCTGTTGGAGCACTTGCACATGATAAAACTTCTATAATATCCTTACCTGTATCAGCAAAATGGAAGACCTTGAGAAAAGTTTGTGCAACCAAAATATTCTCTTCTCAACAGCTTGATTTTACTCAAGCTCTGCGCCTAGAAAAGATGAAAGAACTAGTTGTTTACTTGCAAGAAAATTGCAGAAAGGGTGAAGCTGTTGATATTGGTGAGATTGCATTTACTACAGTGCTTAACTCACTACTAGAATTTTGTTAA 573 0.3805 MDYLKFIPLLSFLYACIHILFFGLNRKNTKSPKLPPSPPCYPIIGNILQLCPTKLHQSLSKLSKTYGPIMTVKIGTITTVVISSPSLAKEALHKNDQALSSRLIPHAVGALAHDKTSIISLPVSAKWKTLRKVCATKIFSSQQLDFTQALRLEKMKELVVYLQENCRKGEAVDIGEIAFTTVLNSLLEFC* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01013 190 SUPERFAMILY Cytochrome P450 29 190 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01013 190 Gene3D Cytochrome P450 21 190 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01013 190 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Rops4g01013 190 Pfam Cytochrome P450 35 186 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01013 190 PANTHER CYTOCHROME P450 FAMILY 1 11 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01013 Rops-Chr4 27405598 27406170 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01013 9 184 Cytochrome P450 AT2G45560 43.333 1.11e-44 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01013 - - pvu:PHAVU_010G012700g 224.557