Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01012 ATGGACATGGACGTGGATGAATCTTCTGGACCCAAAGATGGAAAGCCCGTTTTGGTCATCTTAGTGGGAGCACCGGGGAGTGGAAAGTCCACCTTCTGCGAAGAAGTTATGCGTTCCTCCACTCGCCCTTGGGTTCGCGTTTGCCAGGACACTATTGGAAATGGTAAAGCAGGAAGTAAAGCTCAGTGTCTAGGCAGTGCAGCTAGAGCATTGAACGATGGGAAGAGTGTATTTATTGACAGGTGCAATCTTGACAAAGAACAGCGCTCAGAATTTATGAAGCTTGGTGGTGGAGCCCAAATAGATGTTCATGCAGTTGTACTTGATCTTCCCGCTAAGCTTTGCATTTCACGATCTGTCAAACGAACTGGGCATGAAGGAAATTTGCAGGGTGGAAAAGCCGCTGCAGTTGTGAATAGAATGCTTCAAAAGAAAGAGCTGCCCAAATTAAGTGAAGGTTTTAACCGGATAACATTCTGTCAGAGTGAGAATGATGTCAAAGATGCTATTAATACATACAGCACACTTGGGCCACTGGATAACCTTCCACATGGCTGCTTTGGCCAGAAGAATCCAGATTCCAAAATTCAAGTCGGTATAATGAAGTTCCTAAAAAAAGCAGAGGTCCCAGTTGATGCTGCATCTAGAGAGAATGGCATTGGAGACTCTACTTCCCAGACTCCTGGGAAAAACGATTCCCGCTGCAAAGATATGGAAAAACTTCCCCCAATTCCAGATAATGCTAACTTAGAGTCAAGGGAAGTAAAAGGCCAGGCTGTGGGCTCTGCTGGTTCCCATGCCAATCAAATTTCTCCAGATGATACTCCTACTCTGGCATTTCCATCTATTTCAACATCTGATTTCCAATTCAACCATGAGAAGGCGGCTGATATTATTGTTGAGAAAGTTGCAGAGTTCTCAAATAAGATTGGGAACGCCAGACTTGTTCTAGTTGACTTGACTCATAAATCAAAGATTCTGTCCTTAGTTAAAGCCAAAGTGGCAGAAAAAGGCATTGACCCCCGAAAGTTCTTTACCCATGTTGGAAACATTACTCACCTTTATTCCATAGGTGGTTTGCGCTGTAATGTCATAGCTAATGCTGCCAACTGGCGGTTAAAACCTGGAGGTGGAGGTGTTAATGCAGCAATTTTTAATGCTGCAGGTCCTGAACTAGAATCTGCAACCAAAGAAAAAGCAAAATCTCTTTCACCTGGGAATGCTGTTGTTGTCCCTCTACCTTCATCTTCTCCTTTGTTCACTAGAGAGGGTGTCACCCATGTAATTCATGTTCTTGGACCTAATATGAACCCACAAAGACCAAATTGTCTTAACAATGATTATAATAAAGGTTGCAAAATTCTCCAAGATGCTTATGCTTCACTATTTGAAGGTTTTGCATCAATTGTGAGGAACCAGGCAGAATATCCTAGGGAAAGAAATGAAAACCTTGGAAAAAAGTCTTTGGATTTGAAGGATCAGTCTGAACGTTGTTCTAGAAATTATTTCACAAATACTGATCAAAAGTGTAAGAGAGATGCTGATCATGGATTGGAAAAAAGCAAGAAATACAAGGGAACTCAGGATGGTTTTGGATTGACCTTTACTGATTCTAGAGATGAAAAGGTAGATTCAGAGCATAGAAGAACTGATGGGAGCACGAGTAAGAAATGGGGATCATGGGCTCAAGCTCTTCACCAAATAGCTATGCATCCTGAAAAGCATAAGGATGACTTACTTGAAATTTCAGAAGATGTTGTTGTATTGAATGATCTGTATCCTAAGGCACAGAAGCATGTCCTGGTGTTGTCCCGAACTGAAGGTCTTGATTGCCTGGCAGATGTTAAAAATGAGCATCTTCAATTATTGAAGAAGATGCATGCTGTTGGTTTAAAGTGGGCTGAGAAGTTCTTGCACGAGAGTACATCACTGGTCTTTCGTCTTGGATATCACTTGGCTCCATCAATGCGACAACTACATTTACATGTAATCAGCCAGGACTTCGACTCAAAACATTTGAAGAATAAGAAGCACTGGAACTCATTTAACACTGCTTTCTTTCGCGACTCGGTAGATGTAATTGATGAGATCTCAAGTCATGGAAAAGCAACATTGAAAGATGATGACAAGCTACTGTCTATGGAGTTGAGGTGCCACAGATGTAGAAGTGCACATCCAAACATTCCCAGGTTAAAATCACATATTAGCAGCTGCCAAGCACCCTTTCCTACTTACCTACTTCAAAATGGACGTTTGGTGCATGCACAGGGTGAACCCAGCAATAATTTGTAG 2292 0.4206 MDMDVDESSGPKDGKPVLVILVGAPGSGKSTFCEEVMRSSTRPWVRVCQDTIGNGKAGSKAQCLGSAARALNDGKSVFIDRCNLDKEQRSEFMKLGGGAQIDVHAVVLDLPAKLCISRSVKRTGHEGNLQGGKAAAVVNRMLQKKELPKLSEGFNRITFCQSENDVKDAINTYSTLGPLDNLPHGCFGQKNPDSKIQVGIMKFLKKAEVPVDAASRENGIGDSTSQTPGKNDSRCKDMEKLPPIPDNANLESREVKGQAVGSAGSHANQISPDDTPTLAFPSISTSDFQFNHEKAADIIVEKVAEFSNKIGNARLVLVDLTHKSKILSLVKAKVAEKGIDPRKFFTHVGNITHLYSIGGLRCNVIANAANWRLKPGGGGVNAAIFNAAGPELESATKEKAKSLSPGNAVVVPLPSSSPLFTREGVTHVIHVLGPNMNPQRPNCLNNDYNKGCKILQDAYASLFEGFASIVRNQAEYPRERNENLGKKSLDLKDQSERCSRNYFTNTDQKCKRDADHGLEKSKKYKGTQDGFGLTFTDSRDEKVDSEHRRTDGSTSKKWGSWAQALHQIAMHPEKHKDDLLEISEDVVVLNDLYPKAQKHVLVLSRTEGLDCLADVKNEHLQLLKKMHAVGLKWAEKFLHESTSLVFRLGYHLAPSMRQLHLHVISQDFDSKHLKNKKHWNSFNTAFFRDSVDVIDEISSHGKATLKDDDKLLSMELRCHRCRSAHPNIPRLKSHISSCQAPFPTYLLQNGRLVHAQGEPSNNL* 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01012 763 Gene3D - 3 175 IPR027417 -
Rops4g01012 763 MobiDBLite consensus disorder prediction 262 278 - -
Rops4g01012 763 Gene3D Leucine Aminopeptidase, subunit E, domain 1 336 475 IPR043472 -
Rops4g01012 763 Pfam AAA domain 18 144 - -
Rops4g01012 763 MobiDBLite consensus disorder prediction 216 236 - -
Rops4g01012 763 MobiDBLite consensus disorder prediction 535 554 - -
Rops4g01012 763 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 161 IPR027417 -
Rops4g01012 763 Gene3D Leucine Aminopeptidase, subunit E, domain 1 251 335 IPR043472 -
Rops4g01012 763 SMART YBR022w_8 343 485 IPR002589 -
Rops4g01012 763 FunFam Transcription factor bHLH140 324 471 - -
Rops4g01012 763 SUPERFAMILY Macro domain-like 332 463 IPR043472 -
Rops4g01012 763 ProSiteProfiles Macro domain profile. 331 503 IPR002589 -
Rops4g01012 763 FunFam Transcription factor bHLH140 6 175 - -
Rops4g01012 763 Pfam Scavenger mRNA decapping enzyme C-term binding 567 678 - -
Rops4g01012 763 Gene3D - 560 741 IPR036265 -
Rops4g01012 763 Pfam Macro domain 366 441 IPR002589 -
Rops4g01012 763 Pfam C2HE / C2H2 / C2HC zinc-binding finger 683 736 IPR032566 -
Rops4g01012 763 MobiDBLite consensus disorder prediction 535 555 - -
Rops4g01012 763 FunFam aprataxin isoform X2 559 739 - -
Rops4g01012 763 SUPERFAMILY HIT-like 554 722 IPR036265 -
Rops4g01012 763 PANTHER APRATAXIN-RELATED 278 738 - -
Rops4g01012 763 MobiDBLite consensus disorder prediction 256 278 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01012 7 753 C2H2 Transcription Factor Family AT5G01310 58.768 0.0 870
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01012 K10863 - gmx:100786762 1295.8