Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00997 ATGGCTAAACAAGAAAAACCAAAACCTGGGTGTTTCTCTGGTTTCTTGCGTGTGCTTCTTTGTGCTGGAAATGGAACTAGTCCTCCAGTGTATCCATCAGATCATGCTGATGAAACAGAACAAGTGCATTCCAAAAAAGATAAACTTGTTGATGATGCAATTACCCCTGGAGTGGTTGCAAGGTTAATGGGTTTGGATTCACTTCCAAACACAAAATGGGTAGTGAAAGGAACCACCCCAGATTCAGTTCCAAGAAGTAGGTCAGTGAACTTTGTGGATTACTTGCTAGAGTTTGATCTAGGACATGCAAACCATCGCCGTGTGAAAACCTCATCATCGTTTAGAGAAGTTCCTACATTGGTTCAAAGGCAGAACCGTGATCTGGTTGTACTTGATGATGATAATGATGTGTGTAAAGTTCAAGAGGATGGAGCTAACTTGAGGAAAGTGGAAATGGGTTTGGGTTTGGGAGAATTGAAGCAGAGGAAGAAGAGACAGGGGAGTAAGAGCAAGGAGATTGTGAGAGAGAGGGTGAGTGTGAAGAAGGAGGAAAAGAATCAACAAGGGAAGAACAAGAAGATTTCCAAGTTGAAGAATGAACCAAGAAGGGTCCCTTATTCTAAGAACAGGTCAAGAGTTAGAAATCATAGTGAAGCTAAAGAATTGTCCAATGTATCCCCAAGCTCCAAGAGTTGTAGCTATAGATATAGTGGTGTTGGTTCAAGCTCAAGCTCAAGCTCTTCATTGCCAAATAGGCATAAGAAAGGGTTTGTTGAACCAAAAGTCAAGAACAACATAAGAAACCAGCAGTCACCAAAGAAGATGGAGACAGAATCTAGCTTGGAAAATCTCAGTCCAGTTTCAGTTCTAGACATCAATGACTATCCTCTCCTTAATGGAACTGATTTTCTAGATGGTACAAGCACCTTAGCTTCAAAGTCAAAGTGCAAATCTTCATTGTCAAGGTACTTGGATGATGGTGTTGAAGGGAGAGCAAGCAGTAATAAAGGTAATGCCTACACTGACATCAACAGGGAAGCAGAGTATTACTCAGAATTGATGCTGAAGCTCTGTACTTTGACAGAGAAAGATATAAGAGAGTCAGATTGCACATCAAAGCACATCTCTGAGACTGAAAGCTTTGAGGAAATTTGTTTGGTGTTTGAAGACAAAATTTTCGACCTTTTACTATACGAGGTCGTGAATGAAGTTGTAGAGCTTTCTAGTTGA 1230 0.4073 MAKQEKPKPGCFSGFLRVLLCAGNGTSPPVYPSDHADETEQVHSKKDKLVDDAITPGVVARLMGLDSLPNTKWVVKGTTPDSVPRSRSVNFVDYLLEFDLGHANHRRVKTSSSFREVPTLVQRQNRDLVVLDDDNDVCKVQEDGANLRKVEMGLGLGELKQRKKRQGSKSKEIVRERVSVKKEEKNQQGKNKKISKLKNEPRRVPYSKNRSRVRNHSEAKELSNVSPSSKSCSYRYSGVGSSSSSSSSLPNRHKKGFVEPKVKNNIRNQQSPKKMETESSLENLSPVSVLDINDYPLLNGTDFLDGTSTLASKSKCKSSLSRYLDDGVEGRASSNKGNAYTDINREAEYYSELMLKLCTLTEKDIRESDCTSKHISETESFEEICLVFEDKIFDLLLYEVVNEVVELSS* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00997 409 MobiDBLite consensus disorder prediction 220 252 - -
Rops4g00997 409 MobiDBLite consensus disorder prediction 263 280 - -
Rops4g00997 409 Coils Coil 180 200 - -
Rops4g00997 409 Pfam DUF761-associated sequence motif 55 72 IPR032795 -
Rops4g00997 409 MobiDBLite consensus disorder prediction 161 280 - -
Rops4g00997 409 PANTHER OS05G0128300 PROTEIN 1 408 - -
Rops4g00997 409 MobiDBLite consensus disorder prediction 161 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00997 Rops-Chr4 27112956 27114881 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00997 1 404 TRM (TON1 Recruiting Motif) Superfamily AT5G01370 27.039 6.64e-17 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00997 - - gmx:102668583 380.178