Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00995 ATGGAGGGTCATCATCATCTTCATCCCAAAGGACAACAGCAACAGCAACAGCAACAACAACAGCTTCAGCATCTTCAACCTTATCAGAAGATTAGTAGTGTTAACGTGGATGTCACTGATAGGTTCCCTCAATGGAGCATCCAAGAGACAAAGGAGTTCCTTATGATCCGAGGAGAGCTGGATCAGACTTTTATGGAGACTAAGCGCAATAAACAGTTGTGGGAAGTTATCTCCAACCAAATGAAGGAAAAGGGTTACCATAGAAGTGCAGAGCAGTGCAAGTGCAAGTGGAAAAACCTTGTTACCCGCTATAAGGGATGTGAAACAATGGAGGAAGAATCCTTGAGACATCAATTCCCATTTTACAATGAGCTTCAGGCGATTTTCACAGCAAGGATGCAGAGAATGCTATGGACTGAAGCTGAAGGTAGTTCAAAGAAGAAGGCTGTGCAGTTCTCATCTGATGATGAAGAAGATGGTAATGAAGAGAGTGAAGGTAACAGCAGAAAGAAGAAAAAGGCTAAGATAATTAGTAGAGGAGGTGGTAGTGGAAGTGGCGGTGGTGGTGGAAGTAACAGTTTGAACAATTTGAAGGAGATTTTGGGGGAGTTCATGAGGCAACAGATACAAATTGAAGCACAGTGGATGGAAGCATTTGAGGCTAGGGAGAATGAAAGGATGTTGAAAGAGATGGAGTGGAGGCAACAAATGGAAATGTTGGAGAATGAGAGGATATTAATGGATCAGAGATGGAGAGAAAGGGAAGAGGAATGGAGGGTTAGAGAAGAAGCTAGGGCTGAGAAAAGGGATGCTCTAATCATGGCTCTGCTAAACAAGCTAGAAAGGGATGATACGTAG 858 0.4324 MEGHHHLHPKGQQQQQQQQQQLQHLQPYQKISSVNVDVTDRFPQWSIQETKEFLMIRGELDQTFMETKRNKQLWEVISNQMKEKGYHRSAEQCKCKWKNLVTRYKGCETMEEESLRHQFPFYNELQAIFTARMQRMLWTEAEGSSKKKAVQFSSDDEEDGNEESEGNSRKKKKAKIISRGGGSGSGGGGGSNSLNNLKEILGEFMRQQIQIEAQWMEAFEARENERMLKEMEWRQQMEMLENERILMDQRWREREEEWRVREEARAEKRDALIMALLNKLERDDT* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00995 285 PANTHER FI21293P1 11 281 - -
Rops4g00995 285 MobiDBLite consensus disorder prediction 147 191 - -
Rops4g00995 285 ProSiteProfiles Myb-like domain profile. 45 101 IPR001005 -
Rops4g00995 285 FunFam Zinc finger and SCAN domain-containing 20 45 106 - -
Rops4g00995 285 CDD GT1 43 108 - -
Rops4g00995 285 MobiDBLite consensus disorder prediction 10 24 - -
Rops4g00995 285 Pfam Myb/SANT-like DNA-binding domain 44 128 IPR044822 -
Rops4g00995 285 Gene3D - 45 106 - -
Rops4g00995 285 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00995 Rops-Chr4 27077113 27078713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00995 40 283 Trihelix Transcription Factor Family AT5G01380 53.875 1.07e-72 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Rops4g00995 Myb_DNA-bind_4 6.2e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00995 - - tpra:123892994 359.377