Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops4g00983 | ATGCGTAAGTCTTTCAAGGATTCGCTTAAAGCTCTTGAAGCTGACATACAGTTTGCCAATACTCTAGCTTCTGATTATCCAAGAGAATACGATGGAGCCTGCTTACAAATGAGATTGTCTTATAGCCCAGCTGCTCAATTTTTCCTTTTTCTGGTTCAGTGGACTGATTGCCATCTTGCTGGAGCCTTGGGATTTCTGAGAATTCTCATATACAAGGCATATGATGATGGGAAAACAACCATGTCAATTTATGAAAGGAAAGCCAGTCTGAAGGAGTTTTATGGTGTGATCTTTCCTTCTTTATTACAACTCCACAGAGGAATCAGTGATGTAGAAGACAGGAAACAAAAGGATTTATGTGCTACAAAGTACAAGCCTAAAGATATGATAAGAAAAGGAAAACTGTCTGAAATTGATATAGAGAGAGATGAAGAATGTGACATTTGTATGGAGATGAACAACAAGGTTGTGTTGCCCAATTGCAGCCATTCATTTTGTATGAAATGCTACAAAGACTGGAATACACGATCTCAATCTTGCCCTTTCTGTCGGGACAGTCTTAAAAGAGTAAACTCTGGTGACCTCTGGATCTACATGAGAAGCAGTGAGATAGATGACTTGGCTTCAATCAACAAGGAGAATTTAAAAAGGCTATTCATGTACATTGACAAGTTGCCTTTGATTGTGCCAGATCCAATATTCATGTCTTATCCCCGGCACTTATGA | 726 | 0.3898 | MRKSFKDSLKALEADIQFANTLASDYPREYDGACLQMRLSYSPAAQFFLFLVQWTDCHLAGALGFLRILIYKAYDDGKTTMSIYERKASLKEFYGVIFPSLLQLHRGISDVEDRKQKDLCATKYKPKDMIRKGKLSEIDIERDEECDICMEMNNKVVLPNCSHSFCMKCYKDWNTRSQSCPFCRDSLKRVNSGDLWIYMRSSEIDDLASINKENLKRLFMYIDKLPLIVPDPIFMSYPRHL* | 242 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops4g00983 | 241 | ProSiteProfiles | Zinc finger RING-type profile. | 146 | 184 | IPR001841 | - | |
Rops4g00983 | 241 | ProSitePatterns | Zinc finger RING-type signature. | 161 | 170 | IPR017907 | - | |
Rops4g00983 | 241 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 131 | 193 | IPR013083 | - | |
Rops4g00983 | 241 | SMART | ring_2 | 146 | 183 | IPR001841 | - | |
Rops4g00983 | 241 | PANTHER | RING FINGER PROTEIN 41, 151 | 3 | 237 | - | - | |
Rops4g00983 | 241 | FunFam | RING/U-box superfamily protein | 127 | 193 | - | - | |
Rops4g00983 | 241 | Pfam | Zinc finger, C3HC4 type (RING finger) | 143 | 189 | - | - | |
Rops4g00983 | 241 | SUPERFAMILY | RING/U-box | 134 | 189 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops4g00983 | Rops-Chr4 | 26653538 | 26656843 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops4g00983 | 94 | 188 | C3H Transcription Factor Family | AT5G01960 | 29.000 | 9.99e-08 | 50.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops4g00983 | K25840 | - | zju:107430836 | 411.764 |