Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00981 ATGGCAACTGCCACTGCAACCGCAGCCGCCACTTCATCCTTCATCGGAACCCGACTCCGTGAAGCGCAATCTAATTCGGGTCGGGTACAAGCAAGGTTCGGGTTCGGAAGCAAGAAAACCGCACCTAAGAAGAAGGCGAGGTCGGGTCCGGGTTCCGATCGGCCGTTGTGGTTCCCTGGAGCGAAGGCACCGGAGTGGCTCGACGGGAGCCTCGTCGGAGATTACGGGTTCGACCCGTTTGGTTTGGGTAAACCGGCGGAGTACTTGCAGTTCGAGTTGGACTCGTTGGACCAGAACCTTGCGAAGAACAATGCCGGAGATGTGATCGGGACGAGGACGGAGCTGGCAGACGTGAAATCGACGCCGTTTCAGCCGTACAGTGAGGTGTTTGGGTTGCAGAGGTTCAGGGAGTGTGAGCTTATTCATGGAAGGTGGGCCATGTTGGCCACGCTTGGTGCTCTCACCGTTGAGTGGCTCACCGGAGTTACATGGCAAGACGCCGGCAAGGTGGAGCTAGTAGAAGGGTCATCATACCTTGGGCAACCACTTCCATTCTCAATCACCACATTGATCTGGATTGAAGTTCTTGTGATTGGATACATCGAGTTCCAAAGGAATGCTGAGCTTGACCCAGAGAAGAGACTCTACCCAGGTGGCAAGTTCTTTGATCCTCTTGGCTTAGCTGAAGACCCTGAAAAGAAAGCCACACTTCAATTGGCAGAAATCAAGCATGCTCGTCTTGCCATGGTTGGTTTCCTTGGCTTTGCAGTTCAAGCTGCTGTCACTGGCAAAGGCCCTCTTAACAATTGGGCTACCCATTTGAGTGACCCTCTTCACACAACCATCATTGATACCTTCTCATCTTCCTCTTAA 873 0.5315 MATATATAAATSSFIGTRLREAQSNSGRVQARFGFGSKKTAPKKKARSGPGSDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNNAGDVIGTRTELADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKATLQLAEIKHARLAMVGFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDTFSSSS* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00981 290 Pfam Chlorophyll A-B binding protein 63 259 IPR022796 -
Rops4g00981 290 MobiDBLite consensus disorder prediction 17 31 - -
Rops4g00981 290 FunFam Chlorophyll a-b binding protein, chloroplastic 109 288 - -
Rops4g00981 290 Gene3D Chlorophyll a/b binding protein domain 57 290 - -
Rops4g00981 290 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 3 285 IPR001344 GO:0009765|GO:0016020
Rops4g00981 290 MobiDBLite consensus disorder prediction 17 57 - -
Rops4g00981 290 SUPERFAMILY Chlorophyll a-b binding protein 49 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00981 Rops-Chr4 26614545 26617204 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00981 14 289 Chloroplast and Mitochondria Gene Families AT3G08940 86.282 9.03e-176 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00981 K08915 - rcu:8267514 527.709