Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00963 ATGGGCTCACCTTGGAGGGACGATGCAGCTTCATGGCAACGACGAGATGAGTGGAAGCTGGACACTCCAAGTGAAGATGGGACCTTAAGACAGCATGATTTTCGGGAAGGAACCTCTTGTCCTCCGGCAGGATCTTCACACCAAGAGTGTCGAAATGTTCTACTTGACCTACGGAGTGGAGCCAAAAGGTCACTTGCTGATCCTCCTAAACAAGTCCTTGCTCTAAAACCTCGTGATATTAGTTCAAATAGGCCACCTTCGCTCCTCGTTGGTGGGAGTGATGCCTTTGCACGTTTATATGATAGAAGAATGCTACCGCCTTTGAGCTCCTGTCGGAAAAGAATGTCTCCACCTCCTTGTGTTAATTATTTCTGTCCAATGCATCTTTCTGATCGTGGACATCCAAGCTTGCACTTAACTCGTGTTACATTCAATCCTGATGGGGATCCTGGTCTTCACTTTATGGAGATGCCTGCTCTTGCTTCCTCAGTTGTGGGGGCTCCAAGTTATATGTGCCCAGAGATCCTTGTTGATATACCCTATGGCTCCAAGTCAGATATTTGGTCTTTGGGACGCTGTGTACATGAAATGGCTGCTCATAAGCCAGCTTGTAAGACTCTTGATATGCAAACATTGATTAACAAAATAAACAAGGCTTTAGTGGCAGTCCCTCAACCACTCGGAACACCCATGCAACCCACGTAG 705 0.4695 MGSPWRDDAASWQRRDEWKLDTPSEDGTLRQHDFREGTSCPPAGSSHQECRNVLLDLRSGAKRSLADPPKQVLALKPRDISSNRPPSLLVGGSDAFARLYDRRMLPPLSSCRKRMSPPPCVNYFCPMHLSDRGHPSLHLTRVTFNPDGDPGLHFMEMPALASSVVGAPSYMCPEILVDIPYGSKSDIWSLGRCVHEMAAHKPACKTLDMQTLINKINKALVAVPQPLGTPMQPT* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00963 234 SUPERFAMILY Protein kinase-like (PK-like) 158 225 IPR011009 -
Rops4g00963 234 Pfam Protein kinase domain 161 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g00963 234 MobiDBLite consensus disorder prediction 1 47 - -
Rops4g00963 234 PANTHER WD REPEAT DOMAIN-CONTAINING FAMILY 24 149 IPR045151 -
Rops4g00963 234 MobiDBLite consensus disorder prediction 9 33 - -
Rops4g00963 234 Gene3D Transferase(Phosphotransferase) domain 1 129 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00963 Rops-Chr4 25427367 25428801 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00963 159 201 MAP Kinase Kinase Gene Family AT4G29810 53.488 4.77e-07 47.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Rops4g00963 Pkinase 6.1e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00963 K11807 - gmx:100820036 243.047