Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00943 ATGCCTTCCTCTTCCACTACCATAATCTCCAAATGCATGATCTATCCTGAAATGAAATCCACTATGAAACCCTTGAAACTCTCTGTTTCTGATCTTCCAATGCTTTCATGTCACTATATCCAAAAAGGTGTGTTACTCACTGCTCCAACTTACTCCTTTGATGACCTTATTGTTACTCTTAAGGACTCTCTCTCCGCCACGCTTTCACTTTTCCCCGCCCTCGCCGGCCGCCTCACGACGGATTCCGACGGTTATGTTTACATAACTTGCAACGACGCCGGCGTTGAATTTATTCATGCCAAGGCCAAGCACTTGACGCTAAACGCCGTCGTTTCACCGTCCTTTGTGGATGTTCATCCTTGCTTCAAGGAGTTTTTCGCTTATGACATGACGATTTCCTACTCCGGCCACCATTATTCGCTTGCCGCCGTTCAGATCACCGAGCTCGCCGACGGTGTTTTCGTCGGATGCACCGTGAACCACGCCGTCACCGACGGGACCTCGTTTTGGCACTTCTTCAATACTTTCGCCGCTTTTGCTAAGAACGGTGGCGCGAGGAAGATCTCGAAGTCGCCGGATTTCACTCGCGAGACTATCTTCAACTCCGCCTCCGTACTCCCTGTCCCCGCCGGCGGCCCCGCCGTGACGTTCGACCCCGACGAGCCTCTCCGGGAGCGTGTCTTTCACTTCTCACGTGAAGCGATTCAGAAACTGAAACAGAGAGCTAACGGCAACGAACTCGCCGTTGAGTTAATGGGGAAACACGTGAATGACGGTTGGAAAATCGTTAACCCTAACGGTAACGGAAAGATAACACCCGTCAGTAACGGTAACGGCAACGGAAGAAACGAGATCTCGTCGTTTCAATCGTTGTCCGCTCAGTTGTGGCGTTCGGTGACACGTGCGAGGAAATTAGACCCTACCAAAACGTCGACGTTTCGCATGGCGGTTAATTGCCGCCACAGATTGGAACCAAAGATGGATCCGTTTTACTTCGGCAATGCGATTCAGAGCATCCCAACCGTTGCTTCTGTTGATGACATACTCTCTCACGATCTACGCTTCTGCGCTGAAATGCTCCATCAAAACGTCGTCGCACACGACGCTGATACGGTGCGTCGCGGCATAGAGGATTGGGAGAAGGCACCAAGGTTGTTCCCATTAGGGAACTTCGACGGTGCTATGATTACCATGGGTAGTTCCCCGCGTTTTCCTATGTACGACAATGATTTCGGGTGGGGTCGACCCTTGGCTATTAGAAGCGGAAAGGCTAATAAATTTGACGGCAAGATCTCTGCGTTTCCTGGTAGAGAAGCAAACGGCAGCGTTGATCTTGAGGTCGTTTTGGCCCCCGAAACGATGGCGGGACTAGAAAACGACATGGAGTTTATGCAATACGTCACAGAAACCGTGTGTGTGGTTCAAGTTGCAAAGCAGTGA 1440 0.509 MPSSSTTIISKCMIYPEMKSTMKPLKLSVSDLPMLSCHYIQKGVLLTAPTYSFDDLIVTLKDSLSATLSLFPALAGRLTTDSDGYVYITCNDAGVEFIHAKAKHLTLNAVVSPSFVDVHPCFKEFFAYDMTISYSGHHYSLAAVQITELADGVFVGCTVNHAVTDGTSFWHFFNTFAAFAKNGGARKISKSPDFTRETIFNSASVLPVPAGGPAVTFDPDEPLRERVFHFSREAIQKLKQRANGNELAVELMGKHVNDGWKIVNPNGNGKITPVSNGNGNGRNEISSFQSLSAQLWRSVTRARKLDPTKTSTFRMAVNCRHRLEPKMDPFYFGNAIQSIPTVASVDDILSHDLRFCAEMLHQNVVAHDADTVRRGIEDWEKAPRLFPLGNFDGAMITMGSSPRFPMYDNDFGWGRPLAIRSGKANKFDGKISAFPGREANGSVDLEVVLAPETMAGLENDMEFMQYVTETVCVVQVAKQ* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00943 479 Gene3D - 212 460 IPR023213 -
Rops4g00943 479 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 8 465 - -
Rops4g00943 479 Pfam Transferase family 6 464 - -
Rops4g00943 479 Gene3D - 6 207 IPR023213 -
Rops4g00943 479 Coils Coil 479 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00943 Rops-Chr4 24711533 24713360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00943 59 459 Monolignol Biosynthesis Gene Families AT5G48930 27.670 9.79e-32 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00943 - - gmx:100780358 789.645