Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00942 ATGGAGATTATGGGATGGGTTGGACAGCATGCAAATGTCGTGCCACTTCGCGCTTACTATTATTCCAAAGATGAAAAGCTTTTGATTGGGAAGCCCGAGTTAAAATATCACTTGGCACTGCCAAAGGAATCGCTCACATTCATTGGTGGTGGAAGCAAATTCACACATGAAAACATTAAGTCCTCTAATGTCCTCATCAACCGAGATAATGATGGCTGCATTTTTGATTTTGGCCTAACCCCACTCATGAATGTTCCTGCAACCCCTTCTAGAGCTGCAGGTTATCGTGCTCCTGAGGTGATTGAAACCCGAAAGCACTCTCATAAGGCAGATGGGTATAGCTTGGGTGTCCTCCTTCTCGAGACGCTTGCAGGGAAGGCACCTCTCCAATCTCCGGGACGAAGATATGGCTAA 414 0.4638 MEIMGWVGQHANVVPLRAYYYSKDEKLLIGKPELKYHLALPKESLTFIGGGSKFTHENIKSSNVLINRDNDGCIFDFGLTPLMNVPATPSRAAGYRAPEVIETRKHSHKADGYSLGVLLLETLAGKAPLQSPGRRYG* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00942 137 ProSiteProfiles Protein kinase domain profile. 1 137 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g00942 137 PANTHER OS05G0588300 PROTEIN 1 129 - -
Rops4g00942 137 Gene3D Transferase(Phosphotransferase) domain 1 43 136 - -
Rops4g00942 137 Pfam Protein kinase domain 53 130 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g00942 137 SUPERFAMILY Protein kinase-like (PK-like) 2 131 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00942 Rops-Chr4 24681399 24681888 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00942 1 134 Receptor kinase-like Gene Family AT5G58300 51.250 1.35e-45 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Rops4g00942 Pkinase 5.2e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00942 - - gmx:100796171 189.504