Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00933 ATGCGGAAATTTGGTTTTCTTACGTGGGATGCTCGGATAAAAATTCTTCTTGGAACAGCTAAAGCGCTGGCTTACTTGCATGAGGCAATCGAACCAAAAGTTGTCCATCGAGATATCAAGTCAAGCAACATTCTAATTGATGATGACTTCACTGCCAAAATATCTGACTTTGGGTGGCTAAGTTCGGGTGCAGATCGGGTTTCGTTCGACACGAACTCTCAGTGTCGCTGTGTTCACCACGATATTAGGGTTCCTCTTTCTCCCTTCGTGATCGACGGAGTCTCGATTGGTCCTCGTTTCGTCGTCGATTCCGTTTCGTTCGTTCTTCCGAGGCAAAAGGGACTATTGTGA 351 0.4615 MRKFGFLTWDARIKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFTAKISDFGWLSSGADRVSFDTNSQCRCVHHDIRVPLSPFVIDGVSIGPRFVVDSVSFVLPRQKGLL* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00933 116 PANTHER OS01G0323000 PROTEIN 2 58 - -
Rops4g00933 116 Pfam Protein kinase domain 11 61 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g00933 116 Gene3D Transferase(Phosphotransferase) domain 1 1 82 - -
Rops4g00933 116 ProSitePatterns Serine/Threonine protein kinases active-site signature. 34 46 IPR008271 GO:0004672|GO:0006468
Rops4g00933 116 ProSiteProfiles Protein kinase domain profile. 1 116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g00933 116 SUPERFAMILY Protein kinase-like (PK-like) 3 65 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00933 Rops-Chr4 24312864 24320720 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00933 7 65 Receptor kinase-like Gene Family AT5G56890 61.017 3.40e-20 82.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Rops4g00933 Pkinase 2e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00933 - - gmx:100793499 114.005