Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00884 ATGCAAATGTCTCATATGGATTTGGAGCAAGGAAGTCATCACCATTCTGTGAATGGAAGAGACTTGAGTATGTGCTTCTTTAATTTTGATGGTTCTTGCCATTCCCATTGCTATTCTACAAATGGTGGCTCATATCCTGAGGTTGAGGATGCTGCTAATTCTAGGAGGGCTTCTTCTGCTTCTGATTTGTTAGTGAAAGTGGAAATTAAAAGTGAGGATCCTGAAATTAAGGTGCATTTGGTTGAAGTGGAGAAGGATTGTAGGATTTGTCACCTAGGTTTAGAGAGTGATTGTCAGGAGTTTAGAGCTTTCATCAGATTGGGTTGTTCCTGTAAGGATGATTTAGCTATTGCCCATAAGAATTATGCAGAGACCTAG 378 0.3995 MQMSHMDLEQGSHHHSVNGRDLSMCFFNFDGSCHSHCYSTNGGSYPEVEDAANSRRASSASDLLVKVEIKSEDPEIKVHLVEVEKDCRICHLGLESDCQEFRAFIRLGCSCKDDLAIAHKNYAET* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00884 125 PANTHER ZINC FINGER, RING-CH-TYPE 32 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00884 Rops-Chr4 23459642 23460019 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00884 4 125 C3H Transcription Factor Family AT2G37950 41.406 2.14e-19 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00884 - - gmx:100812277 147.902