Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00860 ATGTGTAGCAGTGTATCAATCAGGGAAGAGATGAATATGTCTCCAGGCAAAGACATGCCCATGTCTAACTTCGCCAACAATAAGAAAATGAAGATGCACATGAGCCTCTATTGGGGCAAAGATGCAATAGTACTTTTCTCTGAGTGGCCTTACCATAGTGTTGGCATGTACATCTTAGCTATCTTGTTTGTGTTTTTCCTTGCTATGTTTTCTGAGCTTATGTCACATCAGCCCATCATCAAGCGTGGGGCTAGTCCTCTCAAGGGAGGGTTGAAGCTGGCTATGGTATATGTCTTACGCATTAGTTTCCATTACTTGGTGATGCTCGCTGTCATGTCCTTCAACTTGGGAATCTTCATAGCTGCTGTGGCTGGCCATACCTTGGGTTTCTTTTTTGCCAAGTCTCGTGCTCTTGCTGTTGCCAACAAAGAACAACATGGGTCCTCCGTTACTAATGAAGTTTGA 465 0.4409 MCSSVSIREEMNMSPGKDMPMSNFANNKKMKMHMSLYWGKDAIVLFSEWPYHSVGMYILAILFVFFLAMFSELMSHQPIIKRGASPLKGGLKLAMVYVLRISFHYLVMLAVMSFNLGIFIAAVAGHTLGFFFAKSRALAVANKEQHGSSVTNEV* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00860 154 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 26 146 IPR007274 GO:0005375|GO:0016020|GO:0035434
Rops4g00860 154 Pfam Ctr copper transporter family 91 132 IPR007274 GO:0005375|GO:0016020|GO:0035434
Rops4g00860 154 Pfam Ctr copper transporter family 34 75 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00860 Rops-Chr4 23005358 23005822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00860 32 146 Inorganic Solute Cotransporters AT5G59040 45.217 2.95e-29 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00860 K14686 - gmx:100808693 204.527