Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00850 ATGGAGGTCTTGGCGAGAAATCACCGGCGTCTGGCTGGAGTGTTGGGGACTATCATCATTGAATGGGACAGGGGAAGGGCTGCCAGTGATGTACTGCTTTCAACAAAGGAGTCTGCACACATTTTTCTGATGGTGCTTCGGAGGTGGGAGTTCAGATTACATATAGAAGGCTTGGATATCAGAAGCACAAGAGACATTGGAAAGAGGTTTCAAGATATTGTTGGAAGTGCTTACTTTGTACTGAAGTCAGGCCCTGAATCAGATGTATGGAGTATTGGTGTGATTACATACATATTGCTTTGTGGGAGATGCCCATTTTGGGATAAGACCGAGGATGGTATCTTCAAGGAGATCTTACGGAACAAGCCTGATTTCCGGCGGAAACCATGGCCAACCATAAGTAATGCTGCAAAAGATTTTGTGAAGAAATTGTTGGTAAAAGATCCACGGGCAAGATTAACTGTTGCTCAGTTAAATGTGGACCAAAAAAAAGCACATAGTGCTGCAGCTTGA 513 0.4425 MEVLARNHRRLAGVLGTIIIEWDRGRAASDVLLSTKESAHIFLMVLRRWEFRLHIEGLDIRSTRDIGKRFQDIVGSAYFVLKSGPESDVWSIGVITYILLCGRCPFWDKTEDGIFKEILRNKPDFRRKPWPTISNAAKDFVKKLLVKDPRARLTVAQLNVDQKKAHSAAA* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00850 170 PANTHER SERINE/THREONINE-PROTEIN KINASE 61 158 - -
Rops4g00850 170 Pfam Protein kinase domain 84 158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g00850 170 SMART serkin_6 3 169 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g00850 170 SUPERFAMILY Protein kinase-like (PK-like) 83 159 IPR011009 -
Rops4g00850 170 Gene3D Transferase(Phosphotransferase) domain 1 69 169 - -
Rops4g00850 170 ProSiteProfiles Protein kinase domain profile. 1 169 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00850 Rops-Chr4 22818667 22820176 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00850 67 157 EF-hand Containing Proteins AT2G17890 82.474 1.15e-51 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Rops4g00850 Pkinase 1.5e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00850 K13412 - cpap:110822505 177.178