Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00848 ATGGCTCGTTTCTGGTCTAAGACCCTTGATGACAAGATCGTGCCAGCTTTATGGAATGCTTGCTGGAGTGATGAGAAGGGGCGTGAGAAAGCTGTGGAGGAAGCCTTGGAAGCTCTCAAGATACTGCAGGATGCATTGCAGGACAAGAAGTTCTTTGGAGGAGAGACCATAGGATTAGTAGATATTGCTGCCAATTTCATTGGGTATTGGGTTGCCATATTACAAGAAATTGCAGGGTTGGAGTTGCTAACCACTGAGAAATTTCCCAAGCTGTGTAAATGGAGTCAAGAATTTGTCAATCACCCTGTGATCAAGGAAGGCCTCCCTCCCAGAGATGAACTGTTTGCCTTTTTCAAGGCTTCAGCTTCAAAGTAG 375 0.456 MARFWSKTLDDKIVPALWNACWSDEKGREKAVEEALEALKILQDALQDKKFFGGETIGLVDIAANFIGYWVAILQEIAGLELLTTEKFPKLCKWSQEFVNHPVIKEGLPPRDELFAFFKASASK* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00848 124 Gene3D - 1 124 - -
Rops4g00848 124 FunFam Tau class glutathione S-transferase 1 124 - -
Rops4g00848 124 Coils Coil 29 49 - -
Rops4g00848 124 Pfam Glutathione S-transferase, C-terminal domain 19 102 IPR004046 -
Rops4g00848 124 CDD GST_C_Tau 1 120 IPR045074 GO:0004364|GO:0006749
Rops4g00848 124 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 1 118 IPR010987 -
Rops4g00848 124 SUPERFAMILY GST C-terminal domain-like 1 121 IPR036282 -
Rops4g00848 124 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 114 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00848 Rops-Chr4 22796374 22798063 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00848 1 120 Glutathione S-transferase Gene Family AT3G09270 56.667 1.37e-44 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00848 K00799 - gmx:100527381 227.639