Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00826 ATGGCTTGGTGCCGCACCCATTTCAACCTCAATCTTCCTTTCCCCTCAGATGCGGCGCCTATTCCCTCCACATGTCACAGTCACTCTCAACTCCCACTCTCTCCTTCCACTCCTACTCTCACTCCTATCACTTCTCTCTTCAAAACAAGAAAGATCACTTTTTCTAGTGCTTCGCGCCGCACCTTTGGGGTCGTGAGCTCTCACATGACCATGGAGGAGAAGCCTATCTCAGAGGACCGAATGCTCGTGTATGTGCCTCCTCATCCGTTGATCAAGCACTGGGTTTCTGTTCTGAGGAATGAGCAAACTCATTGTCCTATCTTCAGAAATGCAATGGCTGAGTTGGGAAGGTTACTTATGTATGAAGCTTCAAGAGATTGGTTGCCCACTGTTTCTGGAGAGATTCAATCACCAATGGGTGTTGCCTCAGTGGAGTTCATTGATCCAAGGGAGCCTGTGGCTGTAATTCCGATATTGAGAGCTGGTCTTGCTCTTGCCGAACATGCATCATCCATCTTGCCAGCAACAAAAACCTATCATCTAGGAATAATCAGAGATGAGGAAACTCTTCAGCCAACTATATATTTGAACAAGTTACCCGAGAAATTTGCAGAAGGATCTAAAGTGTTTGTTGTTGATCCTATGCTGGCAACAGGTGGTACTATAGTAGCTGCCCTGAGTATCTTAAAGGAACGTGGAGTTAGCAACAAGCAGATTAAAGTGATATCTGCTGTTGCTGCCCCTCCAGCCCTTCAAAAGCTGAGTGAGCAGTTCCCTGGGCTTCATGTATATACTGGAATAATTGATCCCACAGTTAATGACAAAGGGTTTATAATTCCTGGCCTTGGAGATGCTGGGGACCGCAGCTATGGTACATGA 879 0.4642 MAWCRTHFNLNLPFPSDAAPIPSTCHSHSQLPLSPSTPTLTPITSLFKTRKITFSSASRRTFGVVSSHMTMEEKPISEDRMLVYVPPHPLIKHWVSVLRNEQTHCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLALAEHASSILPATKTYHLGIIRDEETLQPTIYLNKLPEKFAEGSKVFVVDPMLATGGTIVAALSILKERGVSNKQIKVISAVAAPPALQKLSEQFPGLHVYTGIIDPTVNDKGFIIPGLGDAGDRSYGT* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00826 292 FunFam Uracil phosphoribosyltransferase 81 292 - -
Rops4g00826 292 Gene3D - 70 292 IPR029057 -
Rops4g00826 292 SUPERFAMILY PRTase-like 83 291 IPR029057 -
Rops4g00826 292 CDD PRTases_typeI 148 268 IPR000836 -
Rops4g00826 292 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 84 269 - -
Rops4g00826 292 Pfam Uracil phosphoribosyltransferase 85 292 - -
Rops4g00826 292 NCBIfam uracil phosphoribosyltransferase 83 292 IPR005765 GO:0004845|GO:0006223
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00826 Rops-Chr4 22077285 22083564 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00826 55 292 PRT Gene Family AT3G53900 73.529 6.54e-131 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00826 K00761 - gmx:100797537 474.937