Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00788 ATGGGTAACGGCATCGGAAAAGTGTGTCTCTGTTCCGCCGGCGCCGGAGATATCTCCCGCCGGCACGACATCAACAATCCTCTCGGAGACTCAATCTGCTACGTCCGACCACTGGACCCATTTTACGACGATGACGTCACTTTCCGATTAGTCTCCGGCGCCTCTGTGAGCGCCAACTCTTCCACCGCACCTTCCGCTATCATCGCCGATTCTGTTAATCACAGCGTCGTTTTGGACTCCTCGGCGTCGTTTGAGAGCTCCACGTCGTTCACGTCGTCTTCGTCGTCGTCGATGCCTCTGCAGCACCGTTTTGGTTCCTCTGTGGGTAGCTGCAACGCCGTGTGGTGGAGCCCCATGGACAGAGGGTTCTCTTCGGGTCCTGTGTTGAATGAAAGAGGTTCTTCTGAACAAGTGAAGAAGCTTCGGAGAAGCTTCTCTCATGATGGATATGGGTTTGGAAACAAACCAGGGAAACAAAGCTTGAAGGAGATTCTCAAGAGGGTGATTTCTGGGTACAAGAACAAGAAGAAAGTTAATGTTAATGTTAATGTTAATGCTAATGCTGAGTTGGGTTGTGGTTTGAACTTGCATGATGGTGAGGATGGTAATGGTGTTGATAACTATATGAATGGTGGTGGTAGTGGTGATTTGGTTTTGACGGGAAGTGAGAATCTTCAGTGGGCACAAGGGAGAGCTGGTGAGGATCGTGTGCATATTGTGATTTCTGAGGAACATGAATGGGTTTTCGTGGGAATCTATGATGGGTTTAATGGCCCAGATGCCACTGATTATCTTCTTGACAATCTCTTCTATGCTGTGCATGATGAGCTCAAGGGTCTGCTCTATGGTCACAGTCACAATCACAAGTCAGAGTCCTTGGAGTTGGAGGAGAAAGTGTTGGGTTTGGTTAAGGGAAGTGATGGATCCCAAATGGTTAACAATGGTTGTTCTTCTTCAATTTTAAATAAAGAAAACTATTATCCAATAGGAAATGAAAAGTTAAATTTTAATCACTCTGATGTATTGCTAGCTCTTTCTGAGGCGTTGAGGAAAACGGAGGATGCATTTCTGAGGACTGTGGATGAAATGATAAGTAATAATCCTGTGTTGGCTATGATGGGTTCGTGTGTTTTGGTGATGCTGATGAAGGGAGAAGATGTTTACTTGATGAATGTGGGAGACAGTCGTGCTGTCTTAGCTACTCACACTGCCAATGCCCTTCAGCTAACCATGGAGCATAGCACTCTTATGAAAAAGGAGGTTCATAGAATCAGGAAGGAGCACCCTGATGACCCTTCTGCAATAACTAAAGGCAGGGTGAAAGGTTGCTTGAATGTCACAAGGGCCTTTGGAGCTGGGTTCCTCAAAAAGCCTAAACAAAATAATGCAGTTTTGGAGACTTTCAAAGTTAACTACATAGGGGACTCCCCATACATCACCTGTTCCCCTTCACTCTACCACCATAGGCTTAGCCCAAGTGACAGATTCTTGATACTATCATCTGATGGACTTCACCAATACTTCACCAATGAAGAAGCAGTTGCCAAAGTGGAGTCATTCATCACTATGTCTCCAGATATTGATCCTGCACAACTTCTCATTAAAGAAGCACTATGTAGAGCAGCCAAAAAAGCTGGTTTGGACTTCCATGAGTTGCTTGATATCCCACAAGGGGAACGGCGTCTTTATCACGATGACATTTCTATTGTCATCATCTCCTTTGAGGGAAAAATATGGCGTTCATCAATTTGA 1752 0.4532 MGNGIGKVCLCSAGAGDISRRHDINNPLGDSICYVRPLDPFYDDDVTFRLVSGASVSANSSTAPSAIIADSVNHSVVLDSSASFESSTSFTSSSSSSMPLQHRFGSSVGSCNAVWWSPMDRGFSSGPVLNERGSSEQVKKLRRSFSHDGYGFGNKPGKQSLKEILKRVISGYKNKKKVNVNVNVNANAELGCGLNLHDGEDGNGVDNYMNGGGSGDLVLTGSENLQWAQGRAGEDRVHIVISEEHEWVFVGIYDGFNGPDATDYLLDNLFYAVHDELKGLLYGHSHNHKSESLELEEKVLGLVKGSDGSQMVNNGCSSSILNKENYYPIGNEKLNFNHSDVLLALSEALRKTEDAFLRTVDEMISNNPVLAMMGSCVLVMLMKGEDVYLMNVGDSRAVLATHTANALQLTMEHSTLMKKEVHRIRKEHPDDPSAITKGRVKGCLNVTRAFGAGFLKKPKQNNAVLETFKVNYIGDSPYITCSPSLYHHRLSPSDRFLILSSDGLHQYFTNEEAVAKVESFITMSPDIDPAQLLIKEALCRAAKKAGLDFHELLDIPQGERRLYHDDISIVIISFEGKIWRSSI* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00788 583 Gene3D - 214 580 IPR036457 -
Rops4g00788 583 SMART PP2C_4 218 572 IPR001932 -
Rops4g00788 583 CDD PP2Cc 232 574 IPR001932 -
Rops4g00788 583 SUPERFAMILY PP2C-like 231 575 IPR036457 -
Rops4g00788 583 ProSiteProfiles PPM-type phosphatase domain profile. 219 574 IPR001932 -
Rops4g00788 583 Pfam Protein phosphatase 2C 283 542 IPR001932 -
Rops4g00788 583 PANTHER PROTEIN PHOSPHATASE 2C 222 573 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00788 Rops-Chr4 21069906 21072423 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00788 1 583 PP2C-type Phosphatase Gene Family AT1G07630 46.377 3.06e-176 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00788 - K01102 gmx:100794388 624.78