Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00787 ATGAAATTGGCCTACTGTAACAAGTGTGTTGAAATTAATCAATATGGATACAATTGTACAATTGTTGAGGAAGGTTTTGTTGATCTGAATGATGATGGAGATTTGAATCTGAGTCCTTATGATGGGTCTGACAAGTCAATTGATAAATTTGATGAAAATGTGGAACTGAACAACGATGTTTATAAGAGTGTGACAGAGTTGAATCGAGACTACATTTTAAATTTGGAGTTTGGAAGTAAAAATGAGGCTATAGAGTTTTACAGCAAATATGCCACGTGTCATGAATTTGTTGTTAGAAAAGATGATATGATTAGAGATTTGAAGGGAAATGTTGTCATGCGCCAATTAGTATGCAATAAAGCTGGGTTGAGAAACAAAAAACACATTAAGAGGGTGGATAGAATAAGAGATCATAGACCAATCATACATACTAACTGTGAAGCTAAGTTTGGGGTCCATTTTAATTACCGGACATTGAAATGGAGGGTTGCATCGTTTGAGGATACACATAAGCATTTGCTTACACCATGTGAACAAGTCCACCTTTTTCCTGCGTATCGTAGGCTGACTTATGTAGATGAAGCTCAGGTGGACATCTTGCATCTTTATGGTATAGGTTTCATGCTAGCTCAGAAAGGTGGACATGCAGACTTCAGATTCTGCAAGAAGGATCTATATAATCATCTTGATAAGTAG 696 0.3635 MKLAYCNKCVEINQYGYNCTIVEEGFVDLNDDGDLNLSPYDGSDKSIDKFDENVELNNDVYKSVTELNRDYILNLEFGSKNEAIEFYSKYATCHEFVVRKDDMIRDLKGNVVMRQLVCNKAGLRNKKHIKRVDRIRDHRPIIHTNCEAKFGVHFNYRTLKWRVASFEDTHKHLLTPCEQVHLFPAYRRLTYVDEAQVDILHLYGIGFMLAQKGGHADFRFCKKDLYNHLDK* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00787 231 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 46 189 - -
Rops4g00787 231 Pfam FAR1 DNA-binding domain 85 175 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00787 Rops-Chr4 21048289 21049121 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Rops4g00787 FAR1 7.1e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00787 - - ccaj:109792835 216.083