Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00768 ATGGAGGATGTGATTATCTCTCCTTCTCCTTCTTCCTCTTTGGTCTCTCTTCCCCAAGAAAACCCAACAACAACACCAACCCTTCAACAAAAGCTTCAATTTTTACTCCAAAGCCAACCTGATTGGTGGGTCTATGCCATTTTTTGGCAAACCACAAACGATGAAAATGGAAACCTTTACTTATCTTGGGGTGAGAGCCATTTTCAAGGTTCCAAAGAAACTTCCACAAACACTACTACTACTATTACTATCCTTCACCACCATAACCCCATTTCACAAGAGCGAAGAAAGTTCATGACGTTAATCACTGACAACGACAACAACACTTGTACAAACGGCGATGCAATGGCATCGTCACCGGCGTCCAAGAAAAAAAAGACAATAATCATTGACATCTAA 399 0.411 MEDVIISPSPSSSLVSLPQENPTTTPTLQQKLQFLLQSQPDWWVYAIFWQTTNDENGNLYLSWGESHFQGSKETSTNTTTTITILHHHNPISQERRKFMTLITDNDNNTCTNGDAMASSPASKKKKTIIIDI* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00768 132 PANTHER MYC 19 93 IPR045084 GO:0003700|GO:0006355
Rops4g00768 132 MobiDBLite consensus disorder prediction 1 23 - -
Rops4g00768 132 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 28 99 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00768 Rops-Chr4 20764407 20764805 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00768 15 97 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 33.735 1.78e-10 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00768 - K13422 gmx:100795733 108.612