Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00761 ATGCCCCCCACGTCGGGGAGTGCAATGCAACTCAATACCACTTCTGTTTGTGTCACCCCCTTTGAAATATCAGCCTATAGAGGACATAGGATTCATCACAAAAGTGTCCAATTTGATAATAACATCCTCTCACGTGATGATAATGCCAGGCTCATTTATGTCAATGATCCCATCAAGACAAATTGCAGGTATGAGTTCTGTGGGAATGAGATCCGAACCACCAAATACACTCTTCTAACCTTCTTGCCCAAAAACCTTTTCATTCAGTTTCACCGGGTTGCTTATCTCTATTTCCTTGCCATTGCCGGCCTCAATCAGCTTCCTCCCCTTGCCGTCTTTGGGAGAACGGTGTCCCTTGTCCCCCTCTTGTTGGTTCTTTGTGTCACAGCCATTAAGGATGCGTATGAGGATTGGCGCAGGCACTGGTCGGATCGTAATGAGAACAATCGAGAGTCTCTCGTGCTTCAATTGGGTCAGTTCCAGCCCAAAAGATGGAAAAAAATACAAGCTGGTGATGTTGTTAAAATCTTTGCTGACGAGATGATTCCTGCTGATATGGTCTTGTTGGGGACAAGTGATCAAAGTGGGCTTGCCTCTATTCAGACAATGAATTTGGATGGGGAGTCAAATTTGAAGACAAGGTATGCTAGGCAGGAAACAGCCTCCGCAGTGTTGCCAGAAGCTTGTTCTGTCTCTGGAATTATTAGATGTGAGAAACCTAATCGGAATATTTATGAGTTCACTGCCAACATGGAGTTTAATGGGCGTGAATTTCCCCTTAACCAGTCAAACATTATACTGCGTGGTTGCCTGCTGGAGAACACGGATTGGATAATTGGTGTTGTGGTTTATGCAGGACAGGAAACAAAAGCAATGTTGAACAGTGCAGTTTCCCCTTCCAAGAGAAGCAAACTGGAAAGCCACATGAATAGAGAAACCTTTTGGTTGTCGGTTTTTCTTTGTATCATGTGTGCAGTTGTGGCCCTTGGAATGGGTCTCTGGTTGGTACGCCACAAGAACCAGCTTGATACCTTGCCTTACTACAGGAAAACGTACCTTAACGATGGTCCAAAGAAGGGAAAGAAATATAGATATTATGGGGTACCGATGGAAGCATTCTTCTCCTTTTTGAGTTCTATTATAGTGTTTCAGATAATGATACCAATATCTCTTTACATCACAATGGAGCTGGTTCGTTTGGGTCAGTCTTACTTCATGATTGAAGACAGGGACATGTATGATTCTAATGGTGGATCAAGATTCCAGTGTAGGTCATTCAATATAAATGAAGATTTGGGTCAAATACGCTATGTGTTTTCAGACAAGACCGGAACACTAACAGAAAACAAAATGGAATTCAGGAGAGCTAGTGTACATGGGAAGAACCATGGGAGCTCCTTGCTTATGAATGATACTAATACAGCAGCGGCTGTTAGAGGTAAACGTAGATGGAAGCTCAAATCTGAAATTGCTGTTGATCCTGGATTAATTGCATTGTTGCAGAAAGACCCAAATAGAGATGAAACAGTTGCTGTTCATGAGTTTTTCCTTACATTGGCTGCTTGTAATACTGTGATCCCTGTTCTTAGCAACAGTAAGTTTTCCAGTGGTGGAACAAGTGAATCAAATGAAGATATAGAAAGTATTGATTATCAGGGAGAATCTCCGGATGAGCAAGCTCTAGTATCTGCAGCCTCTGCTTATGGATATACTCTTTTTGAGCGAACATCTGGACATATTGTTATTGATGTCAATGGTGAGAACCTCAGGTTGGATGTATTGGGCCTGCATGAGTTTGACAGTGTGCGAAAGAGGATGTCTGTTGTTATACGATTTCCTGACAATGCTGTAAAGGTGTTAGTTAAAGGTGCTGATACTTCAATGTTTAGCATTTTAGCAGATGACAATAAAAGCAACATTAGCATACGACATTCAACTGAGAGTCATGTGAGTGAATATTCTTTGCAAGGTTTACGAACTCTTGTACTAGCTTCCAGAGATCTTTCAGATGCAGAACTTGAGGAGTGGCAAAGCATGTATGCAGATGCAAGTACTTCATTAACTGACCGAGCTGCAAAACTACGTCAAACAGCAGCTTTTATAGAATGCAACCTAAAGCTGCTTGGAGCAACTGGTATTGAAGACAAGCTGCAAGAGGGTGTACCAGAAGCCATTGAGTCCCTGCGGCAAGCTGGAATTAAGGTCTGGGTTCTTACCGGTGATAAGCAAGAGACCGCAATTTCAATTGGTCTTTCCTGCAAACTTCTTACTGCAGATATGCAGCAGATAATTATAAATGGAACTTCAGAGGTTGAATGCAGAAATCTCTTGGCCGATGCTAAAGCCAAATATGGTGTGAGATCTTCAAGTAGAGGACATCAGAATCTGAAGCACAAAACCAATGCTAGATATGGTGATCCTGATATTTCCAATGATACAAAGTCATTGAGCATGCTCAAGTGGAATCCAGGGAAGGAAGAAGGAACTACTGCTCCATTGGCACTGATAATTGATGGAACCAGTTTGGTTTATATTTTGGAGAAGGAACTGGAGTCAGAGCTTTTCGACCTTGCAACTTCCTGCCGGGTTGTCCTATGCTGCCGTGTTGCACCCTTGCAGAAAGCAGGGATTGTTGATCTGATAAAGAGCCGTACGGATGATATGACATTAGCTATAGGTGATGGGGCCAATGATGTGTCAATGATCCAGATGGCAGATGTTGGTGTTGGAATATGTGGGAAGGAAGGGCGCCAAGCAGTGATGGCATCAGATTTCGCAATGGGACAATTTCAGTTCTTGAAAAAATTACTTCTGGTTCATGGGCACTGGAATTATCAGCGTATTGGTTATTTAGTTCTGTACAACTTCTACCGCAATGCTGTCTTTGTTTTGATGCTATTCTGGTATATATTATGCACTGCTTTTTCTACAACTTCTGCATTGACAGATTTGAGTAGTGTATTATATTCTGTGCTATACACATCTATCCCTACCATCATTGTTGGTGTTCTGGACAAAGACTTGAGTCATAGGACACTCTTGCAGTATCCAAAGCTGTATGGTGCAGGTCACCGGCAAGAGGCTTATAATTTGCAATTATTTTGGATCACAATGATTGACACACTATGGCAGAGCCTTGTTCTCTTCTACATTCCCCTATTCACCTATAAGGACAGCTCAATTGATATATGGAGCATGGGCAGTTTGTGGACAATTTCAGTTGTTATCCTTGTAAATATACACCTGGCTATGGACGTCAACTACTGGGTATTAATTAATCATGTTGCTATATGGGGATCAATAATCATTACATATGTTTGCATGGTGGTGCTGGATTCTATTCCGGTCCTTCCCAATTACTGGACTATTTATCATTTGGCAAGGTCTCCTACATATTGGATAACAATTTTGCTTATAATAATTGTGGCATTGCTCCCTCGCTTTACTTGCAAAGTTGTTTATCAAATTGTTTGGCCTTCGGATATCCAGATAGCTAGAGAAGCTGAGGCAATGAGAAAACAGCATGACGATTTGCAGTCAAGGCAACAAGTTCCCAGTTAA 3561 0.419 MPPTSGSAMQLNTTSVCVTPFEISAYRGHRIHHKSVQFDNNILSRDDNARLIYVNDPIKTNCRYEFCGNEIRTTKYTLLTFLPKNLFIQFHRVAYLYFLAIAGLNQLPPLAVFGRTVSLVPLLLVLCVTAIKDAYEDWRRHWSDRNENNRESLVLQLGQFQPKRWKKIQAGDVVKIFADEMIPADMVLLGTSDQSGLASIQTMNLDGESNLKTRYARQETASAVLPEACSVSGIIRCEKPNRNIYEFTANMEFNGREFPLNQSNIILRGCLLENTDWIIGVVVYAGQETKAMLNSAVSPSKRSKLESHMNRETFWLSVFLCIMCAVVALGMGLWLVRHKNQLDTLPYYRKTYLNDGPKKGKKYRYYGVPMEAFFSFLSSIIVFQIMIPISLYITMELVRLGQSYFMIEDRDMYDSNGGSRFQCRSFNINEDLGQIRYVFSDKTGTLTENKMEFRRASVHGKNHGSSLLMNDTNTAAAVRGKRRWKLKSEIAVDPGLIALLQKDPNRDETVAVHEFFLTLAACNTVIPVLSNSKFSSGGTSESNEDIESIDYQGESPDEQALVSAASAYGYTLFERTSGHIVIDVNGENLRLDVLGLHEFDSVRKRMSVVIRFPDNAVKVLVKGADTSMFSILADDNKSNISIRHSTESHVSEYSLQGLRTLVLASRDLSDAELEEWQSMYADASTSLTDRAAKLRQTAAFIECNLKLLGATGIEDKLQEGVPEAIESLRQAGIKVWVLTGDKQETAISIGLSCKLLTADMQQIIINGTSEVECRNLLADAKAKYGVRSSSRGHQNLKHKTNARYGDPDISNDTKSLSMLKWNPGKEEGTTAPLALIIDGTSLVYILEKELESELFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGKEGRQAVMASDFAMGQFQFLKKLLLVHGHWNYQRIGYLVLYNFYRNAVFVLMLFWYILCTAFSTTSALTDLSSVLYSVLYTSIPTIIVGVLDKDLSHRTLLQYPKLYGAGHRQEAYNLQLFWITMIDTLWQSLVLFYIPLFTYKDSSIDIWSMGSLWTISVVILVNIHLAMDVNYWVLINHVAIWGSIIITYVCMVVLDSIPVLPNYWTIYHLARSPTYWITILLIIIVALLPRFTCKVVYQIVWPSDIQIAREAEAMRKQHDDLQSRQQVPS* 1187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00761 1186 PRINTS P-type cation-transporting ATPase superfamily signature 439 453 - -
Rops4g00761 1186 PRINTS P-type cation-transporting ATPase superfamily signature 892 911 - -
Rops4g00761 1186 Pfam Phospholipid-translocating ATPase N-terminal 52 117 IPR032631 -
Rops4g00761 1186 Pfam Phospholipid-translocating P-type ATPase C-terminal 920 1160 IPR032630 -
Rops4g00761 1186 Gene3D - 705 932 IPR023214 -
Rops4g00761 1186 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 45 1172 - -
Rops4g00761 1186 SFLD C1.7: P-type atpase like 423 943 - -
Rops4g00761 1186 Pfam haloacid dehalogenase-like hydrolase 435 750 - -
Rops4g00761 1186 Gene3D - 126 295 - -
Rops4g00761 1186 SUPERFAMILY Calcium ATPase, transmembrane domain M 64 1159 IPR023298 -
Rops4g00761 1186 FunFam Phospholipid-transporting ATPase 551 695 - -
Rops4g00761 1186 Pfam E1-E2 ATPase 151 397 - -
Rops4g00761 1186 NCBIfam phospholipid-translocating P-type ATPase 66 1167 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Rops4g00761 1186 FunFam Phospholipid-transporting ATPase 124 294 - -
Rops4g00761 1186 NCBIfam HAD-IC family P-type ATPase 862 978 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops4g00761 1186 NCBIfam HAD-IC family P-type ATPase 703 756 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops4g00761 1186 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 445 721 IPR023299 GO:0000166
Rops4g00761 1186 ProSitePatterns E1-E2 ATPases phosphorylation site. 441 447 IPR018303 -
Rops4g00761 1186 Gene3D - 551 681 IPR023299 GO:0000166
Rops4g00761 1186 FunFam Phospholipid-transporting ATPase 704 932 - -
Rops4g00761 1186 SFLD p-type atpase 423 943 IPR044492 -
Rops4g00761 1186 SUPERFAMILY HAD-like 427 936 IPR036412 -
Rops4g00761 1186 SUPERFAMILY Calcium ATPase, transduction domain A 150 291 IPR008250 -
Rops4g00761 1186 CDD P-type_ATPase_APLT_Dnf-like 68 1052 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00761 Rops-Chr4 20658046 20665706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00761 30 1171 Primary Pumps ATPases AT5G04930 55.875 0.0 1302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00761 K14802 - gmx:100788740 1963.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02104 8 49135116 49144308 Rops4g00761 4 20658046 20665706 PCT