Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00756 ATGTCCACTAAAAAGTTAGTTGTGTTTAAGTGTGATTGGTTTGATAACACTCCAAATCGTGGGACAAGAGTAGACAAAAAATATGGAATTGTTGAAGTCAAGGAATCAGGAAGATATAAAAATTATGATCCATTCATATTTGCACAACAAGCTGAGCAAGTCTACTACACGCCATATCCAACCGGACATCGCGGTTGGTTGGCTGTCATTAAGACAAAGGCACGTAGTGCGATCACTAATAACTTAGTCAATCAGGTTGAGAATGAAATTCCATACCAAGATGTGCCTGAAGTTCACGACCTCCATGTAATGTTGCATATTGATGCAGATGTTTATGAAGATAACCTTGTTGATGTTACGGGTGACACTGAGCAAGTTGATATTAGTTTACTCAATATACCCAATATTGGTGACAACAATGAGAGTGAAAGTGACAATGAGAGTGAAAGTGACAATGAGAGTGAAAGTGACTATGAGAGTGAAAGTGTCGAAGAGCTGATTGAGAAGGCAGATGGATTTGCTGGAGTATTCCCAGAGCACAAATATGAAATTGTAAAGAAGTTGCAAGAGAGGAAGCATATTTGTGGAATGACTGGCGATGGTGTCAACGATGCTCCTGCTTTGAAGAAGGCCGATATTGGAATTCTTTATTCTTGA 657 0.3912 MSTKKLVVFKCDWFDNTPNRGTRVDKKYGIVEVKESGRYKNYDPFIFAQQAEQVYYTPYPTGHRGWLAVIKTKARSAITNNLVNQVENEIPYQDVPEVHDLHVMLHIDADVYEDNLVDVTGDTEQVDISLLNIPNIGDNNESESDNESESDNESESDYESESVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGILYS* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00756 218 PANTHER CALCIUM-TRANSPORTING ATPASE 148 215 - -
Rops4g00756 218 MobiDBLite consensus disorder prediction 142 162 - -
Rops4g00756 218 SUPERFAMILY HAD-like 117 216 IPR036412 -
Rops4g00756 218 PRINTS H+-transporting ATPase (proton pump) signature 170 186 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops4g00756 218 PRINTS H+-transporting ATPase (proton pump) signature 198 214 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops4g00756 218 MobiDBLite consensus disorder prediction 133 163 - -
Rops4g00756 218 Gene3D - 119 215 IPR023214 -
Rops4g00756 218 Pfam Domain of unknown function (DUF4216) 4 69 IPR025312 -
Rops4g00756 218 FunFam Plasma membrane ATPase 96 218 - -
Rops4g00756 218 Pfam haloacid dehalogenase-like hydrolase 160 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00756 Rops-Chr4 20275842 20278494 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00756 115 215 Primary Pumps ATPases AT3G42640 60.396 3.76e-30 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00756 K01535 - ccaj:114916771 172.555