Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00667 ATGTTTTTTGTTCCTCCATGTTCTACGCTTCCAGGTTCAACACCCACAGAGATTGGTGATCTTCGTCAACTTGAGATTGTATCATTGGGATTTAACAACTTGAGTGGACCTATTCCTTCAAAACTCCTCAACATTTCAACATTGACATACTTGCATATTGGACACAATTCTCTCTCTGGCATTCTTTCAGCAAACATGGGATATAACCTTCCTAACCTAGAAGAACTATACTTATCTCATAATCAGCTTGTTGGAAACATTCCAAATGGTATATCCAATGCTTCTAAACTCATTATACTGAGCTTGAGTGGCAATGAATTCAACGGAATCATACCCAACGTATTTGGGGATTTAATGGTCCTCGAAATTCTCGATATAGGAGAGAATAATTTGACACTTGAATTCAACTTCTTTACTTCCCTGACGAGCTGCAGACATTTGACACATCTGGGTGTATCAAAGAATAGGTTACTATCAAAACTTCCCAAATCAATTGGAAACTTATCCAAGTCTCTAGAATATTTCTACGCAGATTCTTGTAGAATTTATGGCAATATTCCACTAGAAATAGGAAACATAAGCAACTTGATGGGTTTATCTTTGAGTGAGAATGATATAAATGGACCAATGCCTAGTACATTTAAAAGGTTGCAGAAACTTCAGTATTTGGGTCTTGATTACAATGGATTGCAGGGATCCATAATCGATGAGCTTTGTGAAATTAGTAGTTTGAGTGAGTTGTATCTAACCAACAATAAACTTTCTGGAGCATTACCAACATGCTTGGGAAATATGACTTTTCTTAGAAAGGTACACATAGGATCTAATAGAGTGATCTCTGGGATACCTTCTTCTTTTTGGAGTCTCAAAGATATCTTAGAGGTAAACTTATCCTCCAATGCTTTGATTGGAAATCTTCCACCAGAGATTGGGCAGATGAGAGCTCTTGTACTACTAGATTTGTCAAGAAATCAGATATCAAGCAACATTCCAACAACCATCATTTTCTTGTTAACTTTGCAGACTCTCTCCTTAGCGCATAACAAATTGCAAGGGTCTATCCCTGCATCACTTGGAAAAATGGTAAGCTTGAGCTTCTTGGACTTATCCCACAATCTTTTGTCTGGTGGGATTCCAAAATCCTTGGAATCACTTGCCTATCTTAAATACATAAACTTTTCATACAATAAATTACAAGGGGAGATTCCAGATGGTGGACCTTTCAAAAATTTCACTGCTCAATCTTTCATGTGTAATGAAGCACTTTGTGGCAATCCTCACCTACAAGTACCTCCATGTAGTAAACAAGTTAGGCGAAGGTCAGTGACAAAGAAGCTATTAATCAAATGCATACCACCCTTAATCGTGTCAATCATTTTGATTGCTGCATGCGTAATACTCCTACAGCTTAAAAGGAAAAGGGTTGAGAATCCACTTGAAAGGGATTTATCAACTTTAAGAGTTCCAAGAAGAATATCCTATTATGAAATTGTAAAAGCAACTAATGGATTCAGTGAGAGTAATTTACTTGGAAAGGGGAGCTTTGGTTCTGTGTATCGAGGGATGCTCTCCAACGAAATAATGGTTGCTATTAAAGTAATTGATTTGGACTCAGAAGCATCATCAAGGAGCTTTGATGTAGAATGCAATGCAATGCGTAATCTACGACATCGAAATCTTGTTAAGATTATTAGTAGTTGTTCAAATGTTGATTTAAAATCTTTGGTGATGGAGTTTATGTCAAATGGAAGTGTTGACCAATGGTTATACTCAAATAACTATTGTTTAGATTTCTTGCAAAGGTTGAATATAATGATAGACGTGGCATTTGCATTGGAATATCTCCATCACGGTTCTTTAATACCAGTGGTTCATTGTGATCTGAAGCCTAGTAATGTTTTACTGGATGAAAACATGGTTGCACATGTCAGCGATTTTGGCATTGCGAAGCTCTTAGATGAAGGACAATCTAAAACTCATACCGAGACCTTGGCTACTCTTGGCTACGTTGCACCAGAGTATGGATCAAAGGGAATTATTTCTGTCAAAGGAGATGTGTACAGTTATGGGATTATGTTAATGGAAATGTTCACAAGAAAGAAGCCAACGGATGATATGTTTGTGGCAGGAATGAGCTTGAAATATTGGATTAGTGACTCAATGCCCAATTCAATCATGGAAGTTGTGGATTCTAATTTAATACAACAATATGGGGAACAAATTAATGACATATTGGCTCACATATTATCTATTTTGGAACTAGCCTTGAGTTGTTGTGTAGATTCACCCGAGGCACGAATTACAATTACAGATGTCATTATGTCATTAACCAAAATCAAGACCCAGTTTACATCCAATCTCTGA 2364 0.3689 MFFVPPCSTLPGSTPTEIGDLRQLEIVSLGFNNLSGPIPSKLLNISTLTYLHIGHNSLSGILSANMGYNLPNLEELYLSHNQLVGNIPNGISNASKLIILSLSGNEFNGIIPNVFGDLMVLEILDIGENNLTLEFNFFTSLTSCRHLTHLGVSKNRLLSKLPKSIGNLSKSLEYFYADSCRIYGNIPLEIGNISNLMGLSLSENDINGPMPSTFKRLQKLQYLGLDYNGLQGSIIDELCEISSLSELYLTNNKLSGALPTCLGNMTFLRKVHIGSNRVISGIPSSFWSLKDILEVNLSSNALIGNLPPEIGQMRALVLLDLSRNQISSNIPTTIIFLLTLQTLSLAHNKLQGSIPASLGKMVSLSFLDLSHNLLSGGIPKSLESLAYLKYINFSYNKLQGEIPDGGPFKNFTAQSFMCNEALCGNPHLQVPPCSKQVRRRSVTKKLLIKCIPPLIVSIILIAACVILLQLKRKRVENPLERDLSTLRVPRRISYYEIVKATNGFSESNLLGKGSFGSVYRGMLSNEIMVAIKVIDLDSEASSRSFDVECNAMRNLRHRNLVKIISSCSNVDLKSLVMEFMSNGSVDQWLYSNNYCLDFLQRLNIMIDVAFALEYLHHGSLIPVVHCDLKPSNVLLDENMVAHVSDFGIAKLLDEGQSKTHTETLATLGYVAPEYGSKGIISVKGDVYSYGIMLMEMFTRKKPTDDMFVAGMSLKYWISDSMPNSIMEVVDSNLIQQYGEQINDILAHILSILELALSCCVDSPEARITITDVIMSLTKIKTQFTSNL* 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00667 787 Gene3D Phosphorylase Kinase; domain 1 486 579 - -
Rops4g00667 787 Gene3D Ribonuclease Inhibitor 7 133 IPR032675 -
Rops4g00667 787 SMART LRR_typ_2 70 94 IPR003591 -
Rops4g00667 787 SMART LRR_typ_2 95 117 IPR003591 -
Rops4g00667 787 SMART LRR_typ_2 21 45 IPR003591 -
Rops4g00667 787 SMART LRR_typ_2 241 264 IPR003591 -
Rops4g00667 787 SMART LRR_typ_2 313 337 IPR003591 -
Rops4g00667 787 SMART LRR_typ_2 361 385 IPR003591 -
Rops4g00667 787 ProSiteProfiles Protein kinase domain profile. 504 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g00667 787 SUPERFAMILY Protein kinase-like (PK-like) 480 781 IPR011009 -
Rops4g00667 787 Pfam Leucine rich repeat 315 374 IPR001611 GO:0005515
Rops4g00667 787 Pfam Leucine rich repeat 22 83 IPR001611 GO:0005515
Rops4g00667 787 ProSiteProfiles Leucine-rich repeat profile. 72 94 IPR001611 GO:0005515
Rops4g00667 787 ProSitePatterns Protein kinases ATP-binding region signature. 510 532 IPR017441 GO:0005524
Rops4g00667 787 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 140 437 - -
Rops4g00667 787 SMART serkin_6 504 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g00667 787 Gene3D Transferase(Phosphotransferase) domain 1 580 786 - -
Rops4g00667 787 Pfam Protein kinase domain 505 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g00667 787 SUPERFAMILY L domain-like 16 84 - -
Rops4g00667 787 FunFam Serine-threonine protein kinase plant-type 484 579 - -
Rops4g00667 787 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Rops4g00667 787 Gene3D Ribonuclease Inhibitor 134 441 IPR032675 -
Rops4g00667 787 PANTHER OS04G0122200 PROTEIN 10 783 - -
Rops4g00667 787 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 580 787 - -
Rops4g00667 787 SUPERFAMILY RNI-like 69 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00667 Rops-Chr4 17752353 17756293 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00667 10 783 Receptor kinase-like Gene Family AT3G47570 38.195 1.82e-171 519
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Rops4g00667 Pkinase 1.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00667 - K13420 mtr:25481440 1007.67