Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00666 ATGCACTGGTTACGCTATCGTCTCCTCTATTGCTCTCATTCAATTTGTGCTTATGGTTGGACAACGAAGAAAATTTTTCATGTTATGAACTTAGTTGTCAATGGAGTGCGGGTTATGGTGTTTGGATTAAACAAGCTAGTTTTTCTTTTGCATCCTAAGCTCAACATATGCATTTTTTCGCCTTGTAGATTTGGGTTCATTCTCCCTTCAGTCACTACTCTTCAAAGTCACCTCACCTCATTGACTCCATCGGTGGAAAAATCTTGTTTCTCTATATCTGGGAGAAATCCACAAGTTTCAAGAGTTAGAAAAACAGGTAGTGCTAGAGTAGGCCGCATTGTCATGGCTGCTGCTGCAAAACACCTTACCCCAGTAATTCTAGAACTTGGAGGAAAGTGCCCAGCTGTTGTTGATTCAAATATCAACTTACACGTTACTGCTAGGAGGATAATAGCTGGAAAGTGGGCATGCAATAGTGGACAAGCATGCATTTCTGTTGATTATATCATCACAAAAAAAGAATTTGCTCCAACACTAATAAATGCTCTAAAAGAGGAATTGGAGCAATTTTTTGGAAAAGATCCAATGGAATAA 594 0.3906 MHWLRYRLLYCSHSICAYGWTTKKIFHVMNLVVNGVRVMVFGLNKLVFLLHPKLNICIFSPCRFGFILPSVTTLQSHLTSLTPSVEKSCFSISGRNPQVSRVRKTGSARVGRIVMAAAAKHLTPVILELGGKCPAVVDSNINLHVTARRIIAGKWACNSGQACISVDYIITKKEFAPTLINALKEELEQFFGKDPME* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00666 197 PANTHER ALDEHYDE DEHYDROGENASE 105 196 IPR012394 GO:0006081
Rops4g00666 197 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 98 130 IPR016162 GO:0016491
Rops4g00666 197 Pfam THH1/TOM1/TOM3 domain 13 55 IPR009457 -
Rops4g00666 197 Pfam Aldehyde dehydrogenase family 95 195 IPR015590 GO:0016491
Rops4g00666 197 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 131 195 IPR016163 GO:0016620
Rops4g00666 197 SUPERFAMILY ALDH-like 96 196 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00666 Rops-Chr4 17732176 17736356 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00666 100 197 Aldehyde Dehydrogenase Gene Family AT1G44170 65.306 2.72e-44 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00666 K00128 - gmx:100800699 176.022