Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00623 ATGGTTGTTGTCCACCACCTCTTTTCCACACGTTGGGGATCTTCACAAGGGCTAGGGCCATGGACATCGAGGAGGCCTGGAATACTGATGTGGAGGTTCCATTTTGAAGGGATACGAAAGGCTGTCAAAGGGTACCAGATTACCTACATGCATATACTACATGCTACTTCAGATTTTGAGATGAGGCTATTATGGTTGCCAAGTAGGTTAAGGTCAAAGGGAAGAGGTTGGCGTGGAACTGTCCAAAATTGTGGGTATAGTAAGAGGACACGTCATGGTTCATCAATATATGTGGAAAAGCAAATACCATTTATTGGGATATTGAGCAACAAAGCTGAGGGAATTCCAGATTTTTCAATGAAAATTCATTATTGTGATGGTGCATCATTTAGAAGGGATAGTCAACGTCAGGCAGCAGGGTTATATCTCAGAGAGCAACGCATTTGGCAAGCTGCTATGGAAGACTTAATGTCAAAAGGGATGCGCTATGCCAAACCGGCTCTTCTATCTGGATACTCTGCAGGAGGCTTAGCATCTATACTGCATTGTGATGAATTTTGGGAATTGTTTCCTATAACCACAAGAGTAAAGTGTTTAAGTGATGCTGGATTATTCCTTGATGTTGTTGATGTATTTGGCCGTCACAGTTTAAGGAATATATTCAAAGGTGTGGTCACCTTACAGTGA 687 0.4221 MVVVHHLFSTRWGSSQGLGPWTSRRPGILMWRFHFEGIRKAVKGYQITYMHILHATSDFEMRLLWLPSRLRSKGRGWRGTVQNCGYSKRTRHGSSIYVEKQIPFIGILSNKAEGIPDFSMKIHYCDGASFRRDSQRQAAGLYLREQRIWQAAMEDLMSKGMRYAKPALLSGYSAGGLASILHCDEFWELFPITTRVKCLSDAGLFLDVVDVFGRHSLRNIFKGVVTLQ* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00623 228 Pfam Pectinacetylesterase 73 228 IPR004963 GO:0016787
Rops4g00623 228 PANTHER NOTUM-RELATED 71 228 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00623 Rops-Chr4 16603598 16605910 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00623 73 228 Carbohydrate Esterase AT1G57590 62.500 2.48e-61 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00623 K19882 - gmx:100791571 243.432