Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00614 ATGAGTATGTTGTTGTTCACACGCCATGTCTGCAGCAGCAGCAACACCTCAAAGCTCTCAAAAATTCCAGGGAGGTACAAGAAAGTTGCTATGTCACAAGCCCAGAAAGCCCTCACTGATTATCTTCATGCCACAAGGTGCATCCCTTATGCCTATGCTGATCAAATTGCAAAGAACTCTCTTCTATCCCTCACCAATCTCATTGCAAAGTTGGGATCTTTTCAACCTTCAAGCTTCTCCAAAAACCTTGACAAGTTCCTAAGGTACAACCCCATCAATGAATTTGAGTTTTTCTTTGAAAGCATTGGCATTCAACATAGTAATCTCCATGCTTTGTTGCCACACAACAAGTTCTTCTTTTCTGAAGATGGGTCACTTTTGGATGCTGCTTGTGTGTTATCTGAACTTGGGTTTCCATGGGATAAGCTTGGTTTGTTGTATATGGAGAGTGGTTCTAGATTTAGAAAAAGTGCTTCTGAGTTGAAGGGTAGGCTTTGTTGGTTCAAAAGATATGGTTTTTGCGATGTACAAGTTGTTGGGATATGTTTGGCTTTCCCTTTTGTTTTTTCTGAGGAGGAAGGCCAGTTGGGTGATGAGATTGATGGGTTGTTGAATGATCTTAGGTTGGTGTTTTTTGATTTTGATTTGGCTGGGTCTGTTGAGGGGAACGTGGATGCTTGGCATGAGGTGTGTAGGAAAATCAAGGTGTTTTATGATTTGAATGGTGGCAAGGGTAAGACAGGAGAACTCATTGGAAGGAATAAACATGTCATTCTTGAACATGGAGAAGAGGAGTTGATTCAAAAAGTTGATTTTTTTTGTAGATTTGGTGTCAAGAAGGAGGAAGTAGCTCGGTTGATTCTGCAGGGATCAGAATTGTTGAATCTTGATTTGGAATTGCCGGTGATTAATGTGTTGAAGCTGTTGAAATATTTTGGAATGAGTTCCAAAGATCTTGAGGCTGTTAGGAGGAATCATGCTCATGTGTTGGGAACAAACAAAATTGCTAATCTTCCCAATGTAATGAGGGCTTTGGGTTTACATGAGTGGTTCTTTGATAAAATCAAGGATGGGAATCATCAACTGTTGGTGAATTATATCACAAGCTATCCCAATGAAGACCATGATAAAGGTTATCAAGGTGGTTTAGAGAAAATTGGTGTTTCAAGATACCCAACTCACAATATGAATAAATTAAATTTCTTGCATGCCATAGGCTTTGGAGAAAATGTTCTGACCATGCATATCTTAACTCACTTGCATGGAACCAGTAGCGAGTTACAATGCAGATTTGATTGTCTTCTAAATTCAGGGATTGAATTCTCAAAGCTCTGTAAGATGATTATAATTCAACCAAAGATTCTAAGCCAAAACCCTGAAATTATACAGCAAAAGATTAATTTCCTCTGTCAGGAAATGGGAAACTTGGTTGAGCTTTTAGACACTTTTCCATCATTCTTATGTCATGACTTAGAGAACCGCATTAAGCCTAGGTACAGATTCCATATGTGGGTTTTTGAAAAGGGTCTATCTACCAAAAACTATTCCATTGCGAGCATGATTGCGACCAGTGACAAGAATTTTGTTGCTCGTGCTTTTAAAATTCATCCAGCTGCTCCAAAACATTGGTTTGAGCAATTCTATCTCAGGAAATTGCTAGTATGA 1665 0.3898 MSMLLFTRHVCSSSNTSKLSKIPGRYKKVAMSQAQKALTDYLHATRCIPYAYADQIAKNSLLSLTNLIAKLGSFQPSSFSKNLDKFLRYNPINEFEFFFESIGIQHSNLHALLPHNKFFFSEDGSLLDAACVLSELGFPWDKLGLLYMESGSRFRKSASELKGRLCWFKRYGFCDVQVVGICLAFPFVFSEEEGQLGDEIDGLLNDLRLVFFDFDLAGSVEGNVDAWHEVCRKIKVFYDLNGGKGKTGELIGRNKHVILEHGEEELIQKVDFFCRFGVKKEEVARLILQGSELLNLDLELPVINVLKLLKYFGMSSKDLEAVRRNHAHVLGTNKIANLPNVMRALGLHEWFFDKIKDGNHQLLVNYITSYPNEDHDKGYQGGLEKIGVSRYPTHNMNKLNFLHAIGFGENVLTMHILTHLHGTSSELQCRFDCLLNSGIEFSKLCKMIIIQPKILSQNPEIIQQKINFLCQEMGNLVELLDTFPSFLCHDLENRIKPRYRFHMWVFEKGLSTKNYSIASMIATSDKNFVARAFKIHPAAPKHWFEQFYLRKLLV* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00614 554 Gene3D Transcription termination factor 3, mitochondrial 223 547 IPR038538 -
Rops4g00614 554 Gene3D Transcription termination factor 3, mitochondrial 65 211 IPR038538 -
Rops4g00614 554 SMART mt_12 248 279 IPR003690 GO:0003690|GO:0006355
Rops4g00614 554 SMART mt_12 284 315 IPR003690 GO:0003690|GO:0006355
Rops4g00614 554 SMART mt_12 445 476 IPR003690 GO:0003690|GO:0006355
Rops4g00614 554 SMART mt_12 477 511 IPR003690 GO:0003690|GO:0006355
Rops4g00614 554 Pfam mTERF 425 528 IPR003690 GO:0003690|GO:0006355
Rops4g00614 554 Pfam mTERF 231 333 IPR003690 GO:0003690|GO:0006355
Rops4g00614 554 PANTHER CGI-12 PROTEIN-RELATED 87 535 IPR003690 GO:0003690|GO:0006355
Rops4g00614 554 FunFam Transcription termination factor MTEF18, mitochondrial 383 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00614 Rops-Chr4 16368298 16369962 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Rops4g00614 mTERF 1.5e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00614 - - gmx:100812245 748.429