Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00611 ATGAGAACTCTGCCCTTAAACTTCCCTTGTGCTGTACAAGGAACTATATTTTCTCAAAGGAAACAATTAACTCATGGATGCATGAATCAGAACTCAAAGGATTACCCAACGCAGGATGGATGCATATTTCATTCTGAGAAAGCATTAAGGAGGAAAGTTATCCTTTCTGTTTTGGTCTCAACTGGTGTTTTTCCAACTTTATCTTCTTATGGGAAGACAAAGGGTAAGAATCCTTATAATGAAAAACGCTTGCTACTACAAAATAGGCAGAGACAGAAAGAAAACAATGCACCAGAGGACTTTCCAAACTTTATTAGAGAAGGTTTCGAAGTTAAAGTAGTAACATCAGATGACTATGTAAAGTGTGATTCAGGGCTTATATACCGAGATTTTGAAGTTGGTAAAGGTGATTGCCCAAAGGATGGTCAGCAGATCACTTTTCACTATGTTGGCTATAATGAATCTGGCCGTCGAATTGACAGCACTTATTTGCAGGGTTCTCCTGCCAAAATCCGCATGGGTACCAAGGCATTGGTTCCAGGATTTGAGGAAGGAATTAAAGACATGAGACCAGGTGGAAAGAGAAGAATGATTATTCCCCCTGAACTTGGACCACTGGTAGGACCTTCAACCTTTTTCAGCTCAAAACAGTTTGAAGTTTTTGATGTTGAATTAATAAGCATACAAAACTGCGAAAGAAGGACAATAGCCTTTTACTCTGATGTAGTATGCAATTGA 738 0.3889 MRTLPLNFPCAVQGTIFSQRKQLTHGCMNQNSKDYPTQDGCIFHSEKALRRKVILSVLVSTGVFPTLSSYGKTKGKNPYNEKRLLLQNRQRQKENNAPEDFPNFIREGFEVKVVTSDDYVKCDSGLIYRDFEVGKGDCPKDGQQITFHYVGYNESGRRIDSTYLQGSPAKIRMGTKALVPGFEEGIKDMRPGGKRRMIIPPELGPLVGPSTFFSSKQFEVFDVELISIQNCERRTIAFYSDVVCN* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00611 245 SUPERFAMILY FKBP-like 89 229 - -
Rops4g00611 245 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 142 229 IPR001179 GO:0003755
Rops4g00611 245 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 139 204 IPR001179 GO:0003755
Rops4g00611 245 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP20-2, CHLOROPLASTIC 7 245 IPR044239 -
Rops4g00611 245 Gene3D - 87 237 IPR046357 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00611 Rops-Chr4 16315192 16319787 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00611 132 231 Calmodulin-binding Proteins AT5G48570 34.314 9.53e-11 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00611 - - gmx:100305486 429.483