Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00590 ATGTCCAAAGTTGCAGTTTCATTCATTCACATCTTCAAGAGTGAAGAGCTTGCTTTCAGTGTCCTGGTATCAAGGTTCTTGCTTGGAGAAGCATTCCCTATGCTGGTTTACCTTTCACTAGTGCCAATTATTGGTGGTTGTGCACTAGCTACTGTGACAAAGCTCAATTTCAAAATGATTGGGTCCCAAGGTGTGAGCTACAGGGTGGCAAATAACTATGTCTCAGATTGA 231 0.4242 MSKVAVSFIHIFKSEELAFSVLVSRFLLGEAFPMLVYLSLVPIIGGCALATVTKLNFKMIGSQGVSYRVANNYVSD* 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00590 76 PANTHER SOLUTE CARRIER FAMILY 35 4 72 - -
Rops4g00590 76 Pfam Triose-phosphate Transporter family 1 61 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00590 Rops-Chr4 15924444 15924962 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00590 1 64 Antiporters AT5G54800 75.000 1.08e-26 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00590 K15283 K05350 gmx:100790658 101.679