Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00588 ATGGTGAAAGGAAAGCTTGTTTTATGTGGAGATGTTGGGCAAGAAGATTATGCTTATTATAAGGGTGCAATTGGTACAATCATAAAGGATGATGGAAACCCTTACAATGTTGTGTCTTTTGTGACTTATTTACCTTCATTGATTCTAGATTCAAAAGACTTTGCTCTTGTTCGATCCTACAAAAATTCAACAAAGAATCCAAAAGCTGAAATACTTAAGAGTGAGATCTTTGATGACCAAACTGCTCCTAAAATTGCTAGTTTCTCTTCTCGTGGGTCAAATTTCTTAATTCCTGAGATTTTGAAACCAGATATAAGTGCCCCAGGATTGGATATGTTAGCTGCATTTTCACCTGAAGCTTCACCCTCAGGATCTTCATATGACAAGAGAAAGGTCAAATACAATATATTATCAGGAACTTCTATGGCGTGCCCCCATGTTGCTGGAATAGCCGCATATGTGAAATCATTTCACCCAGATTGGTCACCAGCAGCCATCAAATCAGCTATTATGACTACAGCACAACCTTTGAATGGTACATATAATATGACTGGTGAGTTTGCTTATGGAACTGGGAATGTCAATCCACAACAAGCTATTGACCCTGGTCTTGTTTATGACATTTCTAAGGAAGATTATATACAAATGCTTTGCAACTATGGTTATGATGCTAAAAAAAATTAA 684 0.3684 MVKGKLVLCGDVGQEDYAYYKGAIGTIIKDDGNPYNVVSFVTYLPSLILDSKDFALVRSYKNSTKNPKAEILKSEIFDDQTAPKIASFSSRGSNFLIPEILKPDISAPGLDMLAAFSPEASPSGSSYDKRKVKYNILSGTSMACPHVAGIAAYVKSFHPDWSPAAIKSAIMTTAQPLNGTYNMTGEFAYGTGNVNPQQAIDPGLVYDISKEDYIQMLCNYGYDAKKN* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00588 227 Gene3D - 2 78 - -
Rops4g00588 227 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 225 IPR045051 -
Rops4g00588 227 Pfam Subtilase family 81 177 IPR000209 GO:0006508|GO:0008236
Rops4g00588 227 ProSitePatterns Serine proteases, subtilase family, serine active site. 139 149 IPR023828 -
Rops4g00588 227 ProSiteProfiles Serine proteases, subtilase domain profile. 1 200 - -
Rops4g00588 227 SUPERFAMILY Subtilisin-like 82 201 IPR036852 GO:0004252|GO:0006508
Rops4g00588 227 Gene3D Peptidase S8/S53 domain 79 213 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00588 Rops-Chr4 15915524 15916207 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00588 1 224 Subtilisin-like Serine Gene Family AT5G59190 55.752 4.23e-81 254