Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00564 ATGGGGTGGAAATGGGAAGGTCCTAGAACGCTGGAGACGGTTACCGGAGTTCGTCAGCGACGAGGTTGTGACTGTGATTGTGCCTGGGCTAAGAACCATTTAGCATACACGTGGAGAAGAAGGACAAAGAGGATTACTAGGAGCAAGGAAACAATGGTGTTGGATGTGACAAAGTTCTTGGAGGAACATTTCGGAGGGGAAGAGGTGCTTCTAGAGGTGGCAGGGAAGGATGCAACTAAGGAGTTTGATGCTATTGGACACAGCAAAGAAGCTCAAAAATTGGTCCTCAAATACCAAGTGGGTGTCCTCCAAGGTGCCACTGTTGAAGAGGTAGACTTTAAGGATGTTATGGACAAGGGACCAAAGAGCAAAGAGATGAGTGCCTTTGTGATCAAAGAGGATGGGGTGTCCAAGTCTGTGACATTTTATGAGTTCTTTGTTCCAATTCTTCTTGCCACTCTCTATTTTGGTTACCGATGCCTCACCAAAGCATGA 495 0.4667 MGWKWEGPRTLETVTGVRQRRGCDCDCAWAKNHLAYTWRRRTKRITRSKETMVLDVTKFLEEHFGGEEVLLEVAGKDATKEFDAIGHSKEAQKLVLKYQVGVLQGATVEEVDFKDVMDKGPKSKEMSAFVIKEDGVSKSVTFYEFFVPILLATLYFGYRCLTKA* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00564 164 PRINTS Cytochrome B5 signature 91 103 IPR001199 -
Rops4g00564 164 PRINTS Cytochrome B5 signature 53 63 IPR001199 -
Rops4g00564 164 PRINTS Cytochrome B5 signature 63 77 IPR001199 -
Rops4g00564 164 PRINTS Cytochrome B5 signature 78 85 IPR001199 -
Rops4g00564 164 Pfam Cytochrome b5-like Heme/Steroid binding domain 52 103 IPR001199 -
Rops4g00564 164 PANTHER CYTOCHROME B5 51 161 - -
Rops4g00564 164 Gene3D - 24 109 IPR036400 -
Rops4g00564 164 SMART Cyt_b5_2 36 104 IPR001199 -
Rops4g00564 164 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 53 104 IPR001199 -
Rops4g00564 164 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 49 108 IPR036400 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00564 Rops-Chr4 15467550 15468148 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00564 53 163 NADPH P450 reductases AT5G48810 41.739 1.54e-17 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00564 - - gmx:100797990 178.333