LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops4g00564	ATGGGGTGGAAATGGGAAGGTCCTAGAACGCTGGAGACGGTTACCGGAGTTCGTCAGCGACGAGGTTGTGACTGTGATTGTGCCTGGGCTAAGAACCATTTAGCATACACGTGGAGAAGAAGGACAAAGAGGATTACTAGGAGCAAGGAAACAATGGTGTTGGATGTGACAAAGTTCTTGGAGGAACATTTCGGAGGGGAAGAGGTGCTTCTAGAGGTGGCAGGGAAGGATGCAACTAAGGAGTTTGATGCTATTGGACACAGCAAAGAAGCTCAAAAATTGGTCCTCAAATACCAAGTGGGTGTCCTCCAAGGTGCCACTGTTGAAGAGGTAGACTTTAAGGATGTTATGGACAAGGGACCAAAGAGCAAAGAGATGAGTGCCTTTGTGATCAAAGAGGATGGGGTGTCCAAGTCTGTGACATTTTATGAGTTCTTTGTTCCAATTCTTCTTGCCACTCTCTATTTTGGTTACCGATGCCTCACCAAAGCATGA	495	0.4667	MGWKWEGPRTLETVTGVRQRRGCDCDCAWAKNHLAYTWRRRTKRITRSKETMVLDVTKFLEEHFGGEEVLLEVAGKDATKEFDAIGHSKEAQKLVLKYQVGVLQGATVEEVDFKDVMDKGPKSKEMSAFVIKEDGVSKSVTFYEFFVPILLATLYFGYRCLTKA*	165

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops4g00564	164	PRINTS	Cytochrome B5 signature	91	103	IPR001199	-
	Rops4g00564	164	PRINTS	Cytochrome B5 signature	53	63	IPR001199	-
	Rops4g00564	164	PRINTS	Cytochrome B5 signature	63	77	IPR001199	-
	Rops4g00564	164	PRINTS	Cytochrome B5 signature	78	85	IPR001199	-
	Rops4g00564	164	Pfam	Cytochrome b5-like Heme/Steroid binding domain	52	103	IPR001199	-
	Rops4g00564	164	PANTHER	CYTOCHROME B5	51	161	-	-
	Rops4g00564	164	Gene3D	-	24	109	IPR036400	-
	Rops4g00564	164	SMART	Cyt_b5_2	36	104	IPR001199	-
	Rops4g00564	164	ProSiteProfiles	Cytochrome b5 family, heme-binding domain profile.	53	104	IPR001199	-
	Rops4g00564	164	SUPERFAMILY	Cytochrome b5-like heme/steroid binding domain	49	108	IPR036400	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops4g00564	Rops-Chr4	15467550	15468148	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Rops4g00564	53	163	NADPH P450 reductases	AT5G48810	41.739	1.54e-17	72.8

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops4g00564	-		-	gmx:100797990	178.333

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