Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00524 ATGATGAAGCATGCGAGGCCAATATCAAATGCATCTCTTGATGTTGTCCAAGGAGGTCGATCAGTTGAGGTAAGAGCAGTTGGTGTGTCAAAGGTTGAGAAAAGAGCTCAGGCTCTAGAAGCAGCAAATGTGCATGTCATTTTAGAAAATGAACCTTTGATAGATAAGCTTATCTTGGAGGTTCTAAACTTTGGTTCTTCCTTCCCAGTTACTTCCTCTGAAATGTGGAGGAAGAGTTATCTATGGGGGAAAGATTGTGAAGGGGTTGAGGATGCTGATGCAGTCCAGGCTAAGATCTCCTTCGGCATTATAGAAAAAGGTACGCTGTTGAATGTGAAAGGCAAGTCTAAAGATTCCATCTTAGCGAGGCTTGACATGGTGGAGTTAGGTATAAGGAGTAAACTTGCTCCAATTGAAAAGGATAACAAAATATACTTGCCTCTTGCATGCTATACAATATCAAAGGAAGAGAAAAGAAGTTTTTGTCAGTTTGTGAAGGAATTGAAGGTGCCTGAAGGATACTCTTTCAATTTAAGGTCCCGGGTTAATATGAAGGTTAACAAGGAGGTTCAAAATGGTGCATCCATTGATGATACATTGAGATGGCTTGGTCATATGCCACAATCATGCGTCCTGAGCTACGAAGGGTACATTATTAATGGTTATAGGTTTCATACCATGCATAGACACACCATGCAAAGCCATCAAAACTCCAGAGTAACACTAGTAGCTGAATTCATCCATGTGTCATCAATGATGGATCAGAACACAATATTGCCTTCTACCTCATACTTTGGGAGGATAGAACAAATTTACGAACTTGATTACGTAAAATTTAGAGTAGCTGTTTTCAAATGCATATGGTTTGACCCTACAGGAGTCAATGTGGATGACATAGGCTTCATAATAATAGATCACAAAAAGATTGGGTTTAAGAATGATCCGTTTAATCTTACTACACAAGGTAGACAAGTCTTATATGTCGATGATTGTAGCAATGGTTCTCAAAAAATTGTATTGGCATGTAATTCAAGATTCGTAACTGAAGGTTACTCAGTAGGGGAAGATTACATGGAAATGCAGACATTTAGCAGATTACTTAGTCCCTTTCCACTGAGTGATGGTGATGATGAACCAAATTAG 1143 0.3902 MMKHARPISNASLDVVQGGRSVEVRAVGVSKVEKRAQALEAANVHVILENEPLIDKLILEVLNFGSSFPVTSSEMWRKSYLWGKDCEGVEDADAVQAKISFGIIEKGTLLNVKGKSKDSILARLDMVELGIRSKLAPIEKDNKIYLPLACYTISKEEKRSFCQFVKELKVPEGYSFNLRSRVNMKVNKEVQNGASIDDTLRWLGHMPQSCVLSYEGYIINGYRFHTMHRHTMQSHQNSRVTLVAEFIHVSSMMDQNTILPSTSYFGRIEQIYELDYVKFRVAVFKCIWFDPTGVNVDDIGFIIIDHKKIGFKNDPFNLTTQGRQVLYVDDCSNGSQKIVLACNSRFVTEGYSVGEDYMEMQTFSRLLSPFPLSDGDDEPN* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00524 380 PANTHER DUF4218 DOMAIN-CONTAINING PROTEIN-RELATED 104 185 - -
Rops4g00524 380 Pfam Domain of unknown function (DUF4216) 273 335 IPR025312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00524 Rops-Chr4 14617566 14632740 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00524 7 31 Trehalose Biosynthesis Gene Families AT1G78580 88.000 4.95e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00524 - - cmo:127143916 177.563