Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00516 ATGGATTCGTTTGGGTCAAATGGAAGTGAGAATGAGGATTCCTTGCCACCACCGCCTCCCGTTGTCCACTCGGATGTTGTGCCAGTCAAAGCTGAACTAGAGCTCCCCCCTGAGCCAGCTAAGAAAAAGGTTTCCCGTGTTCCAATAGCTAGGTGTGGTCTAGGAACAAAGGGAATGAAGTTGCCCCTTCTAACCAATCACTTCAAAGTTAATGTTGCTAACAACGACGGACATTTCTTCCAATATAGTGTCTCGGTTTCTTATGAAGATGGACGCCCTGTAGAAGGAAAGGGTGTAGGGAGAAAAGTGATAGACAGGGTTCAGGAAACTTATGATTTTAAGTTGAATAGAAAGGACTTTGCTTATGATGGTGAAAAAACACTGTTTACTATTGGCTCGTTTGCTTGA 408 0.4412 MDSFGSNGSENEDSLPPPPPVVHSDVVPVKAELELPPEPAKKKVSRVPIARCGLGTKGMKLPLLTNHFKVNVANNDGHFFQYSVSVSYEDGRPVEGKGVGRKVIDRVQETYDFKLNRKDFAYDGEKTLFTIGSFA* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00516 135 MobiDBLite consensus disorder prediction 1 28 - -
Rops4g00516 135 Pfam N-terminal domain of argonaute 61 134 IPR032474 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00516 Rops-Chr4 14498812 14499219 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00516 35 132 Eukaryotic Initiation Factors Gene Family AT1G48410 32.323 7.84e-07 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00516 K11593 - gmx:100779439 187.963