Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00514 ATGTACTGGGGTTTTCTTCTTCGCTCTCTTCTCTTGACCTTTTTCGTCGTCAAAGGTTCAACCTTGCAGCTTCCAAATTCAATGGCATTGGGTACTGGATTCACTCAATTTGTTGAAACTGGCCCTGATGCCCACAAGTTCAATCCAGCAAGATTTGCAAATGGCGTGCTTGGAGCTTGCAAGATTCCACAAGCTTATATGCCATTTGGGATAGGGGCTCGTGTATGTGTTGGACAACATTTAGCCGTGACAGAACTGAAGGTGATTTTATCTCTCATTCTGTTGAAGTTTCAGTTCTCTCTCTCATCAAGTTACTACCCTTCACCTTCCTATCATTTGGTTATGGAACCTGGCCATGGAGTTGTTCTCAAGATGACAAGAATTTAA 387 0.4289 MYWGFLLRSLLLTFFVVKGSTLQLPNSMALGTGFTQFVETGPDAHKFNPARFANGVLGACKIPQAYMPFGIGARVCVGQHLAVTELKVILSLILLKFQFSLSSSYYPSPSYHLVMEPGHGVVLKMTRI* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00514 128 PRINTS E-class P450 group I signature 76 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g00514 128 PRINTS E-class P450 group I signature 1 7 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g00514 128 PRINTS E-class P450 group I signature 66 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g00514 128 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 69 78 IPR017972 GO:0005506|GO:0016705
Rops4g00514 128 Gene3D Cytochrome P450 12 128 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g00514 128 SUPERFAMILY Cytochrome P450 41 127 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g00514 128 Pfam Cytochrome P450 42 115 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g00514 128 PANTHER CYTOCHROME P450 FAMILY MEMBER 41 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00514 Rops-Chr4 14418737 14423052 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00514 41 125 Cytochrome P450 AT5G24900 52.941 2.45e-30 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00514 K24544 - gmx:100780335 147.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g00514 4 14418737 14423052 Rops4g00514 4 14418737 14423052 ECH