Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00513 ATGTCCTACTATCAATCAAAGTCCGATAAGAACGACGCCGTTTACAGAAAAACTGGGCGATCCTCGACCTTCAATCAGAGAGGTTCATACGGCAGGGGCACCGGTGGTGGCGGCGGTGGCGGTGGTGGACCGGCGCCGTCGATCACCTCCTCGGCTTCATCACTCTCCTCTAACCGGAGTTTTAACAAGAGGTCTAATAATGCACAAGGTGGGCAATCTAGGGTAAACCCTTCACCAGTGAATTCAACCGAGTCTAATAGTGCTTCTGCTGCCCGGACCGTACATAATGGTGCCCATGTACAGCCTCAATTCCATGGAGCATCTGATGGGCCAGTTACTAAGTCCTCTGAATCATCAGCTGCACAGAGGAGTACTAGAGTTGTTCCAAAAGCTCCAACTTCTCAACTGCCCCCCTTGAGTTCTGATACAGCCGCTCCTGCAAGCCCTGCTAAGGGAGATGCATCTAAGGCATTCCCTTTTCAATTTGGATCAATCATTCCTGGGTTTATGAATGGAGTGGCAATTCCTGCTCGTACAAGCTCAGCTCCTCCTAATATAGATGAGCAGAAGCGTGATCAGGCTCGTCATGACTCTTATAAATCTGGGCCTTCAGTGCCAATACCTCCTGTTCCAAAGCAGCAGCAGCCACCTAGGAAAGATACAGGTGTCATTGAGCAATCTAATCCTGGGGAGACTCATTTAGGGACTAAGGCTAAAAAGGATCCGCTGCTGTCAGCTTTGACCCCAGCAAGCCAGATGCAGAAGCCTTCTGTTGTTCATGTAACTGGGATTTCAATGGCAATGCCATATCACCAGTCACAGGCATCCTTGCAGTTTGTTGGTCCTAATCCACAGATTCAATCTCAGGGTATGTCAACGACGTCCCTTCAGATGCCTATACCGATGCCTTTACCAATTGGAAATGCTGCACATGGGCAACAGCCAGTTTTTGTTCCAGGTCTTCAGCCTCATCCGATGCACCCTCAAGGGATCATGCATCCAGGCCAAAACATGAGTTTCACCCCTCAAATGGGTCATCAGTTGTCCCATCAATTTGGCAACATGGGCATTGGCATCAGCCCCCAATATCCCCAGCAGCAGGGAGGAAAATTTGCCGGTACAAGAAAAACTACTCCTGTGAAGATAACTCATCCTGAGACGCATGAAGAGCTGAGGCTTGATAAAAGGGCAGATGCATATTCAGATGGTGGATCATCTGGTGCTAGGTCACATCCTAACATACCTTCTCAATCCCAACCTGTTAAATCTTTTGCAGCTTCTCATCCTATGAACTATTATCCATCCAGCTCATATAATACCAGTTCTCTCTATCATCCACCTTCTAGTTCTCTTCCAATAACAAGTAGCCAGATCACTCCTAATCCTCAGCCACCAATATTTAATTATCCCGTGAACCAAGGTCCACAAAATGTGGGTTTCATGAATTCATCATCACTCAGTTCCCTGCCTGTTAATAAACCTAGCACTCCGAATCCTGGCATTGTTGAACCACCTATTGCAGAATATTCCCGTGACGTGCATAATGCGATGTCATCAGCTCCAACAGGGGTTGCTTCAGTGACTATCAAACCAAGTGGTGCATCTGTTGTTGTGGACTCATCGTTGGCTAATTCCAGTATTTCTGATGTTGAAAATAGAGAATCTCCTAGTTCAGCAGCATCTGGTGATGCTTGCTCCACTGTGCCACAAAAAGCATCTGAAGAATTTTCGGTAATCTCTTCACAACAGTCTAAGTCTTCCAGTGATTCTTCAGTTTTGAGTTCATTGCCAACACAATCCGCTGCATCTGTTTCTGTAACTGCTGAAAAGCTTAGTGTTACTCCTTCGGTGCTGCCTACATCAACTGTGAATGAGGATTATGTCTCAGTTGTTTCTAATAATGAAGACAGAAGGAGGGAATCTCTAAGTAGGTCCAACTCTTTGAAGGATAACCAAAAGAAACCAGGGAAAAAAGGTCAATCATCACAACATCAGGTTTATGTGCAATCTCCTTCGGTGGCTAATATGCCTTCTCAAGCTGTTGACAGTGGTATATCTGATACGGGAGTTTCTGAACCTGTAGGAACTAAAACAAACCATTCTTTGGCAATTGCCACTGAAGATATTCCTAAATTTGACACATTATCTGGTAGCATTTCTAGTGCTGTTGAAATGAAGGCCAACATGCCTGAAGACGTTTCTGCTCGTGTTTCAGCTGAAGGATCTGGTGCTCAAGCTGCTGATGGTTTGAACAATCATAAACATGATAAGACAGATAAATCATCCAAAGATTTCATACAAACCGAAAAAGATGCTGCAAATGTAAGCACTGAGCTGTCAACCGGTAAAACAATACAGCAAGGACAGGATGAATCTGCGAGTTGTAGTGCAGAATGTGACAGGACAGATCTGCAGTCCACTGATCTTCCAGAAACGACGTTGAAGGATGTCAATGATAGTTCAGAGAATGCTGGCAGTGATGAAATGTCTCTTTCAGCGTCAGGTACAAAGGATAGACCAATTTTAGAACCAAATAAGGTGAAAAATACATCTAAAGGGAAGAAGAAAAAAAGAGAGATTCTTCAGAAAGCGGATGCTGCAGGGTCAACTTCTGATCTTTATAATGCATACAAGGGACCGGAGGAAAAGAAAGAAGCTGTCTTAATTTCAGAGAGCTCAGAAAGTGCTTCTACATTGGGAAGTTTGAAGCAGCCGCCTGCAGATGCTGTTCAGTCAGATTCTGTAACAAGTGAGAAATGTGGACTCAGTAAAGTTGAGCCTGATGACTGGGAGGATGCTGCTGACATGTCTACACCAAAGCTGGAAGTTGATGATAAATCTCAACAGGTTAGTGATGGAAGTGGAGGTACAGCCAAACAGTACTCTCGTGATTTCCTTTTGAAATTTGCAGAACAATGCACTGATCTTCCTGAAGGTTTTGAAATCTCGGCAGACATAGCTGAGGCTTTGATGAGTGCTAATATTAGTAGTTCTCATGTTATTGAGCGTGATTCACATCCTAGTCCTGGAAGAATTGTAGATAGGCAAGGTGGGATGTCTTGGATGGAACGCCGTGGGAATGTTGTGACTGAGGACGACAGATGGAATAAAGTTTCAAGTGCTTTTCATTCTGGACGTGTTTTGGATGGTATTGGAGGAAATGCAGGATTTCGATCTGGCCAAGGAGGCAATTTTGGTGTTTTAAGGAATCCTCGTGTCCAGACGCCCCTGCAACCTGCTGGGGGGATCCTTTCTGGGCCAATGCAATCTTTAGGAAATCAGGGTGGAATGCAAAGAAATATCCCTGATGGGGAGAGGTGGCAGCGTGCTGCTAGCTTTCCACAGAGGGGTTTGTTTCCTTCTCCTGCTCCCCAATCTCACTTGCAGATGATGCACAAAGCTGAGAAGAAGTATGAAGTGGGTAAAGTGGCAGATGTGGAAGAGGTAAAACAGAGGCAGTTGAAAGCTATCTTGAACAAACTAACTCCTCAGAATTTTGATAGACTTTTTGAACAGGTGAAAGCAGTTAATATTGATAATGCAGTCACTCTCACTGGTGTCATTTCACAATTATTTGAGAAGGCTTTGATGGAACCTACCTTCTGTGAAATGTATGCCAACTTCTGTTTACATTTGGCTTCTGAGTTGCCTGATTTTAGTGAGGACAATGAAAAGATAACTTTTAAAAGGTTACTGTTAAACAAGTGCCAGGAGGAATTTGAGAGGGGTGAAAGAGAGCAAGAAGAAGCAAATAAGGTTGATGAGAGTGGGGTCAAGCAGTCTGTTGAAGAAAGGGAACAGAGAAGAATCAATGCAAGAAGGCGCATGTTGGGGAACATCAGATTGATAGGAGAACTATATAAGAAGAAAATGTTGACAGAAAGGATAATGCATGAGTGTATCAAGAAGCTACTGGGTCAGTATCTGGATCCTGATGAGGAAGATATTGAAGCTTTATGCAAGCTGATGAGTACTATTGGGGAGATGATTGACCATCCCAAAGCCAAGGAACATATGGATGCATATTTTGAAAGGATAAAATTATTATCAAACAACATGAATTTATCTTCTAGGGTGAGGTTTATGTTGAAGGATGTCATTGATTTGAGAAAGAATAAATGGCAACAAAGGAGAAAAGTTGAAGGTCCAAAGAAGATTGAGGAGGTACATAGAGATGCCGTGCAGGAGAGGCAGGCTCAAGCTGGCAGGCTGGGTCGGGGTATGGGCAACAATCAGTCGGCAAGAAGGAACCCCATGGATTTTAGTCCAAGAGGATCATCTATGTTGTCTTCTCCTAATGCTCAGATGGGTGGACTGCGTGGGCTGCCTACTCAAACTCGTGGTTATGGTTCACAGGATGCTCGTTTTGAGGAAAGGCAATCTTATGAGGCTAGGACCGTGTCAGCTACTTTGCCTCAAAGACCCTTAGGTGATGATTCCATAACCTTGGGACCCCAAGGTGGTCTTGCTAGGGGAATGTCCATTAGAGGATCAACAGCAATATCTAATTTGCCGATATATGATTTGCATCCTGGGGCTGGAGACTCCAATAGAATGACTACTGGTCTTAATGGTAATAGCAATTTGTCAGAGTGCACACCATATAGCTCAAGGGATGATCTTGCATCAAGGTATAATACAGATAGGTTTTCAGGTCCAGCTGCGTATGATCAATCAAGTGCTCCAGAGCGTAATATGAACTATGGTAACAGAGACTTGAGGAGTGCGGGTCAGAATCTTGACAGACCTGTTGCAACTTCACCTTCTGCTCAGCAAGGGTCAATAGTCTCTCAGAATGCTTCTTCCAGGAAGGTTTGGCCAGAAGAACGACTGCGGGACATGTCATTGTCAGCAATAAGAGAATACTACAGTGCTAGAGATGAGAAGGAAGTTGCACTGTGTGTCAAAGATTTGAACTCACCAAGCTTTCATCCTTCCATGATTTGTCTCTGGGTCACAGACTCGTTCGAGAGAAAGGACACAGAAAGAGATCTTTTGGCCAAACTGCTTATCAATCTTGTGAACTCTCAGGATGGTACATTGAGTCAAGCTCAGCTCGTCAAAGGGTTTGAATCTGTTCTCAGCACATTGGAGGATGCTGTTAATGATGCCCCCAGAGCACCAGAGTTTCTTGGCCACATTTTCGCAAAAGTTATAACAGAGTCAGTAGCCACTTTGAATGAGATTGGGCAGTTAATCCATGATGGTGGAGAGGAGCCAGGTAGTCTCTTAGAAGTTGGTCTTGCAGCTGATGTTCTTGCAAGCACCTTGGAGATAATAAAAAATGAGAGAGGGGATGCGGCTCTAAGTGAGATCCGTAAAAGCTCTAACTTGAGGTTGGAGACTTTCCGGCCACCTAATCCTATTACATCAAAGAAGTTGGAGAAATTTATTTAG 5397 0.443 MSYYQSKSDKNDAVYRKTGRSSTFNQRGSYGRGTGGGGGGGGGPAPSITSSASSLSSNRSFNKRSNNAQGGQSRVNPSPVNSTESNSASAARTVHNGAHVQPQFHGASDGPVTKSSESSAAQRSTRVVPKAPTSQLPPLSSDTAAPASPAKGDASKAFPFQFGSIIPGFMNGVAIPARTSSAPPNIDEQKRDQARHDSYKSGPSVPIPPVPKQQQPPRKDTGVIEQSNPGETHLGTKAKKDPLLSALTPASQMQKPSVVHVTGISMAMPYHQSQASLQFVGPNPQIQSQGMSTTSLQMPIPMPLPIGNAAHGQQPVFVPGLQPHPMHPQGIMHPGQNMSFTPQMGHQLSHQFGNMGIGISPQYPQQQGGKFAGTRKTTPVKITHPETHEELRLDKRADAYSDGGSSGARSHPNIPSQSQPVKSFAASHPMNYYPSSSYNTSSLYHPPSSSLPITSSQITPNPQPPIFNYPVNQGPQNVGFMNSSSLSSLPVNKPSTPNPGIVEPPIAEYSRDVHNAMSSAPTGVASVTIKPSGASVVVDSSLANSSISDVENRESPSSAASGDACSTVPQKASEEFSVISSQQSKSSSDSSVLSSLPTQSAASVSVTAEKLSVTPSVLPTSTVNEDYVSVVSNNEDRRRESLSRSNSLKDNQKKPGKKGQSSQHQVYVQSPSVANMPSQAVDSGISDTGVSEPVGTKTNHSLAIATEDIPKFDTLSGSISSAVEMKANMPEDVSARVSAEGSGAQAADGLNNHKHDKTDKSSKDFIQTEKDAANVSTELSTGKTIQQGQDESASCSAECDRTDLQSTDLPETTLKDVNDSSENAGSDEMSLSASGTKDRPILEPNKVKNTSKGKKKKREILQKADAAGSTSDLYNAYKGPEEKKEAVLISESSESASTLGSLKQPPADAVQSDSVTSEKCGLSKVEPDDWEDAADMSTPKLEVDDKSQQVSDGSGGTAKQYSRDFLLKFAEQCTDLPEGFEISADIAEALMSANISSSHVIERDSHPSPGRIVDRQGGMSWMERRGNVVTEDDRWNKVSSAFHSGRVLDGIGGNAGFRSGQGGNFGVLRNPRVQTPLQPAGGILSGPMQSLGNQGGMQRNIPDGERWQRAASFPQRGLFPSPAPQSHLQMMHKAEKKYEVGKVADVEEVKQRQLKAILNKLTPQNFDRLFEQVKAVNIDNAVTLTGVISQLFEKALMEPTFCEMYANFCLHLASELPDFSEDNEKITFKRLLLNKCQEEFERGEREQEEANKVDESGVKQSVEEREQRRINARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQYLDPDEEDIEALCKLMSTIGEMIDHPKAKEHMDAYFERIKLLSNNMNLSSRVRFMLKDVIDLRKNKWQQRRKVEGPKKIEEVHRDAVQERQAQAGRLGRGMGNNQSARRNPMDFSPRGSSMLSSPNAQMGGLRGLPTQTRGYGSQDARFEERQSYEARTVSATLPQRPLGDDSITLGPQGGLARGMSIRGSTAISNLPIYDLHPGAGDSNRMTTGLNGNSNLSECTPYSSRDDLASRYNTDRFSGPAAYDQSSAPERNMNYGNRDLRSAGQNLDRPVATSPSAQQGSIVSQNASSRKVWPEERLRDMSLSAIREYYSARDEKEVALCVKDLNSPSFHPSMICLWVTDSFERKDTERDLLAKLLINLVNSQDGTLSQAQLVKGFESVLSTLEDAVNDAPRAPEFLGHIFAKVITESVATLNEIGQLIHDGGEEPGSLLEVGLAADVLASTLEIIKNERGDAALSEIRKSSNLRLETFRPPNPITSKKLEKFI* 1799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00513 1798 MobiDBLite consensus disorder prediction 750 767 - -
Rops4g00513 1798 MobiDBLite consensus disorder prediction 1552 1602 - -
Rops4g00513 1798 MobiDBLite consensus disorder prediction 385 427 - -
Rops4g00513 1798 MobiDBLite consensus disorder prediction 631 657 - -
Rops4g00513 1798 SUPERFAMILY ARM repeat 1147 1375 IPR016024 -
Rops4g00513 1798 MobiDBLite consensus disorder prediction 890 919 - -
Rops4g00513 1798 SMART if4_15 1151 1373 IPR003890 GO:0003723|GO:0005515
Rops4g00513 1798 MobiDBLite consensus disorder prediction 1243 1265 - -
Rops4g00513 1798 Coils Coil 1233 1253 - -
Rops4g00513 1798 MobiDBLite consensus disorder prediction 385 399 - -
Rops4g00513 1798 MobiDBLite consensus disorder prediction 628 695 - -
Rops4g00513 1798 MobiDBLite consensus disorder prediction 545 568 - -
Rops4g00513 1798 SUPERFAMILY ARM repeat 1606 1793 IPR016024 -
Rops4g00513 1798 MobiDBLite consensus disorder prediction 219 233 - -
Rops4g00513 1798 Gene3D - 1604 1798 - -
Rops4g00513 1798 FunFam Eukaryotic translation initiation factor 4G 1604 1797 - -
Rops4g00513 1798 MobiDBLite consensus disorder prediction 658 695 - -
Rops4g00513 1798 MobiDBLite consensus disorder prediction 176 238 - -
Rops4g00513 1798 MobiDBLite consensus disorder prediction 768 833 - -
Rops4g00513 1798 Pfam MIF4G domain 1151 1373 IPR003890 GO:0003723|GO:0005515
Rops4g00513 1798 MobiDBLite consensus disorder prediction 1405 1438 - -
Rops4g00513 1798 MobiDBLite consensus disorder prediction 1399 1438 - -
Rops4g00513 1798 FunFam Eukaryotic translation initiation factor 4G 1151 1386 - -
Rops4g00513 1798 Gene3D - 1151 1386 - -
Rops4g00513 1798 MobiDBLite consensus disorder prediction 1543 1602 - -
Rops4g00513 1798 ProSiteProfiles MI domain profile. 1610 1734 IPR003891 -
Rops4g00513 1798 SMART ma3_7 1611 1725 IPR003891 -
Rops4g00513 1798 MobiDBLite consensus disorder prediction 46 96 - -
Rops4g00513 1798 MobiDBLite consensus disorder prediction 731 932 - -
Rops4g00513 1798 Pfam MA3 domain 1616 1721 IPR003891 -
Rops4g00513 1798 MobiDBLite consensus disorder prediction 108 142 - -
Rops4g00513 1798 MobiDBLite consensus disorder prediction 406 427 - -
Rops4g00513 1798 MobiDBLite consensus disorder prediction 1 153 - -
Rops4g00513 1798 MobiDBLite consensus disorder prediction 939 958 - -
Rops4g00513 1798 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 351 1798 IPR045208 GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00513 Rops-Chr4 14399154 14413141 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00513 1 1797 Eukaryotic Initiation Factors Gene Family AT3G60240 47.101 0.0 1372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00513 K03260 - gmx:100798562 2405.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g00513 4 14399154 14413141 Rops4g00513 4 14399154 14413141 ECH