Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00511 ATGTATATCTCTTTGTCTTCCTCATCAGAAACTAGTCCAAGCAACACAAGAGGCACTGGCTCAGGCTCAGGCTTGGGCACAGAAAATACTAGCAATCATGCTTCTACCAAATATGTCACAGCTGAAGGAGAGACAGTATTTGCAAGTGCTGAACCTGAACACAAAAACAGTGGAATCAGCTCTTCTAGGAGCAAGAGCATGCATCATCAACCATCATTTCCTGTGGTTGAAACACCAAGGGAGATACCATACAAGGAGATTGTTTCAGCCACAGATAATTTCTCAGAGTCAAGAAGGGTGGCAGAGGTAGATTTTGGAACTGCCTACCATGGCATCCTTGATGATCATTATCATGTCATGGTGAAACGCCTTGGCATGAAGACATGCCCCGCGTTGCGCCAAAGATTCTCCAATGAACTAAGGAATTTGGCAAGACTCAGGCATAGAAATTTGGTGCAACTTAGAGGATGGTGTACTGAGCAAGGAGAGATGCTTGTGGTTTATGATTACTCAGCAAGGCTAATTCTAAGTCACCAACTTCACCACCATAACAATGGTAGACATGGGTATACTGTACTCAAATGGTATCATAGATACAACATAGTGAAATCACTTGCATCTGCGCTTCTCTATCTGCATGAGGAATGGGATGAGCAAGTCATTCATAGGAACATCACCTCTTCAGCAATCATTCTTGAACCTGACATGAACACAAGACTAGGTAGTTTTGCTCTAGCTGAATTTTTGTCAAGAAATGAGCATGGTCATCATGTAATCATTGACAAGAGCAAATCGGTTCGTGGGATTTTCGGCTACATGTCACCGGAATATATGGAATCCGGTGAGGCAACAGCTGCTGCTGATGTTTATAGTTTTGGTGCGGTGGTGCTTGAAGTTATCAGTGGACATATGGCTGTGGATTTTAGGCAACCAGAGGTACTATTGGTAAAGAAGGTTCATGAATTTGAAATGAGGGACAGACCATTGGAGCAATTAGCAGATATAAGACTAAATGGAGAGTACAATTACAAAGAATTTATGAGATTGGTAAGATTAGGAATTGCATGCACACGTTCTGACCCAAAATTAAGACCAAGCACAAGACAAATAGTGAGCATCCTTGATGGCAATGACAAATTAATCATGGGGGAAGAGAACATGGAGAGCAGGGAAGAATGGAGACAAAGAAATGCTTGTTCTATGTCACTGGTTAAGAGAATCCAAGCTCTTGGAATACAGTAA 1242 0.4203 MYISLSSSSETSPSNTRGTGSGSGLGTENTSNHASTKYVTAEGETVFASAEPEHKNSGISSSRSKSMHHQPSFPVVETPREIPYKEIVSATDNFSESRRVAEVDFGTAYHGILDDHYHVMVKRLGMKTCPALRQRFSNELRNLARLRHRNLVQLRGWCTEQGEMLVVYDYSARLILSHQLHHHNNGRHGYTVLKWYHRYNIVKSLASALLYLHEEWDEQVIHRNITSSAIILEPDMNTRLGSFALAEFLSRNEHGHHVIIDKSKSVRGIFGYMSPEYMESGEATAAADVYSFGAVVLEVISGHMAVDFRQPEVLLVKKVHEFEMRDRPLEQLADIRLNGEYNYKEFMRLVRLGIACTRSDPKLRPSTRQIVSILDGNDKLIMGEENMESREEWRQRNACSMSLVKRIQALGIQ* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00511 413 PANTHER - 48 378 - -
Rops4g00511 413 FunFam Receptor like protein kinase S.2 172 398 - -
Rops4g00511 413 FunFam Receptor like protein kinase S.2 53 170 - -
Rops4g00511 413 MobiDBLite consensus disorder prediction 54 71 - -
Rops4g00511 413 Gene3D Phosphorylase Kinase; domain 1 54 170 - -
Rops4g00511 413 MobiDBLite consensus disorder prediction 1 39 - -
Rops4g00511 413 MobiDBLite consensus disorder prediction 1 76 - -
Rops4g00511 413 ProSiteProfiles Protein kinase domain profile. 94 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g00511 413 PIRSF ILK 30 401 - -
Rops4g00511 413 SUPERFAMILY Protein kinase-like (PK-like) 67 374 IPR011009 -
Rops4g00511 413 Pfam Protein tyrosine and serine/threonine kinase 98 373 IPR001245 GO:0004672|GO:0006468
Rops4g00511 413 Gene3D Transferase(Phosphotransferase) domain 1 176 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00511 Rops-Chr4 14344306 14347006 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00511 79 375 Receptor kinase-like Gene Family AT5G65600 38.111 3.72e-61 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Rops4g00511 PK_Tyr_Ser-Thr 4.4e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00511 - - lja:Lj0g3v0078479.1 657.907