Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00498 ATGGGCCTTGCTATCCTTGCGCGGGCTGCTGCTGATGGTCACGGAGTTGAGGGCCTGCTGACATACTTCATCAAGTCTTGGAATGAACTGTCAAACATTACCCCTAGCGACACCCACTTGGTCTCAATCCATAGTAGCATTAAACGGCTCGATGCTAACTCCGAGAGTGCAACCCGTGTTATGAATGGACTCATAGTGTACAAGCAACTTAGTAAGAAGTTGATGACCATTTTGGTAGCATGCGTGAATATTGCCCAGGTCGTCATGCGGGATGTCACAAAACTCCACTCACACCCAGGCTCTCACTCATCATTTTCCTCTTACGAGCCATGCATGCAGCTCCTAGCAACCCTTCATACACCACAGATGTCACCAAATTTTCTGCTCTGGCTGGTGCTTGGTGTTTTCTTGATGGCTACAATGTTAAGGATGCATGCAACATGTCAACAGCTTCAAGCACAGGCCCAAGCTCATACAGCAGCAGCCAGTGGCCTTCTTGGCCACACAGAACTGCGGTTGCATATGCCACCATCAATAGCACTCGCAAGCCGAGGGAGTCTGCAGGGTCTCAGACTTCAGCTTGCACTCCTTGATCGGGGGTTTGATGATCTAGACTATGAAACTTTAAGAGCTCTGGATTCAGATAATATTTCTACTGCACCTTCTATGACTGAGGAAGAGATAAATGCTCTTCCTGTCCACAAATACAAGGTTTCTAGTACCCAGAGTAGTTCCTCCATGCAACAAGCATCGCCTCACTCCCACGATGATGTTGGGTGGCTCAAGACCGTCGATCAGTACTACGTTGGAGCCAACAATTCCATTCGGGGTGCATGTGTGCAGAACGTGCTGGATTATATGATATCCGCGCTGTTGGAGGACAAGGGAATCTAA 894 0.4855 MGLAILARAAADGHGVEGLLTYFIKSWNELSNITPSDTHLVSIHSSIKRLDANSESATRVMNGLIVYKQLSKKLMTILVACVNIAQVVMRDVTKLHSHPGSHSSFSSYEPCMQLLATLHTPQMSPNFLLWLVLGVFLMATMLRMHATCQQLQAQAQAHTAAASGLLGHTELRLHMPPSIALASRGSLQGLRLQLALLDRGFDDLDYETLRALDSDNISTAPSMTEEEINALPVHKYKVSSTQSSSSMQQASPHSHDDVGWLKTVDQYYVGANNSIRGACVQNVLDYMISALLEDKGI* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00498 297 PANTHER TARGET OF ERK KINASE MPK-1 117 250 - -
Rops4g00498 297 Pfam Glycosyl hydrolases family 38 N-terminal domain 252 295 IPR000602 GO:0004559|GO:0006013
Rops4g00498 297 SUPERFAMILY Glycoside hydrolase/deacetylase 252 295 IPR011330 GO:0005975
Rops4g00498 297 Gene3D Glycoside hydrolase 38, N terminal domain 250 297 IPR027291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00498 Rops-Chr4 13978935 13979828 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00498 90 283 C3H Transcription Factor Family AT3G55530 57.653 4.88e-59 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00498 K16283 - gmx:100777936 201.83