Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00497 ATGAGCACTTCACCACTTTACGTGTATAGGAACATTTTTGCTGAAGATATTGGTCGCACAAAGACCAATGAAGAGATTTATGGTGTTTTGTCTTTGGTGTTTTGGACTGTTACATTGGTGCCTCTGGTGAAGTATGTGTTCATAGTGCTTAAAGCTGATGATAATGGTGAAGGTGGCACGTTTGCACTTTACTCTTTGCTATGTCGCCATGCCCGAGTTGGCTTATTGCCCAATTGCCAATTGGCAGATGAGGAGCTCTCAGAGTACAAGAAGCAATGTTACGATGTAGCACCAAATAGAAGCCTTGCTTTGAGGCTTAGGTCCATGTTGGAGAAACACACGGTGTTGCAGAGGGTTTTGCTGGTTCTGGCTTTGATAGGGACTTGCATGGTGATTGGCGTTGGTATCCTTAAACCGGCTATTTCTGTTTTCTCTGCGGTGTCTGGTCTTGAGCTTTCAATGTCCAAGGAGCATCATAGATATGTAGAAGTTCCAGCTACATGCATCATATTGATAGGCTTATTTTCCCTTCAACGTTATGGCACACATAGGGTTGGCTTCTTGTTCGCTCCTATAGTTTGTACATGGCTTTTCTGCATTGGTGCCATTGGTATATACAATATTTTTTACTGGAATCCTCATGTATACCAAACACTCTCTCCATATTATGTTTTCCAATTTTTAAAGAAGGCTCAGAAAGGAGGTTGGATGGCCCTTGGTGGAATTTTGCTGTGCATAACAGGATCAGAAACTATGTTTGCTGATCTTGGGCACTTTTCACAAGCGTCAATCAAGATTGCTTTCACCTCTGTGGTTTATCCATCTTTAATTCTTGCTTATATGGGACAAGCTGCTTATCTTTCTAGGCATCATGATGTTGAGCAGGAGTATCACTTTGGTTTCTATGTATCTGTACCAGAGAAGTTGAGATGGCCAGTTCTGGTGATAGCCATACTTGCTGCAATTGTGGGAAGCCAATCCATCATCACAGGAACTTTCTCAATCATCAAGCAATGCTCTGCATGGAGTTGCTTCCCAAGAGTTAAAGTGGTTCACACTTCATCCAAAATTCATGGACAAGTGTATATCCCTGGGATCAACTGGCTTTTGATGCTCTTGTGTTTGGCTGTAACTATTGGTTTCAGAGACACAAAACGTATGGGTAATGCATCAGGAATGGACAAGTACGAGAAGTTAGAGAAGGTTGGTGAAGGAACATACGGAAAGGTGTACAAGGCAATGGAGAAATCAAGTGGGCAAGTCGTAGCATTGAAGAAGACCCGTCTCGAGATGGACGAGGAAGGTGTCCCTCCAACTGCCCTCAGAGAAATCTCAATCCTCCAACTGCTCTCAATCCATCTATGTCGTACGCCTCATCGATGTTGA 1386 0.4307 MSTSPLYVYRNIFAEDIGRTKTNEEIYGVLSLVFWTVTLVPLVKYVFIVLKADDNGEGGTFALYSLLCRHARVGLLPNCQLADEELSEYKKQCYDVAPNRSLALRLRSMLEKHTVLQRVLLVLALIGTCMVIGVGILKPAISVFSAVSGLELSMSKEHHRYVEVPATCIILIGLFSLQRYGTHRVGFLFAPIVCTWLFCIGAIGIYNIFYWNPHVYQTLSPYYVFQFLKKAQKGGWMALGGILLCITGSETMFADLGHFSQASIKIAFTSVVYPSLILAYMGQAAYLSRHHDVEQEYHFGFYVSVPEKLRWPVLVIAILAAIVGSQSIITGTFSIIKQCSAWSCFPRVKVVHTSSKIHGQVYIPGINWLLMLLCLAVTIGFRDTKRMGNASGMDKYEKLEKVGEGTYGKVYKAMEKSSGQVVALKKTRLEMDEEGVPPTALREISILQLLSIHLCRTPHRC* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00497 461 Pfam Protein kinase domain 396 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g00497 461 Pfam K+ potassium transporter 2 393 IPR003855 GO:0015079|GO:0016020|GO:0071805
Rops4g00497 461 ProSitePatterns Protein kinases ATP-binding region signature. 402 425 IPR017441 GO:0005524
Rops4g00497 461 ProSiteProfiles Protein kinase domain profile. 396 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g00497 461 Gene3D Phosphorylase Kinase; domain 1 381 455 - -
Rops4g00497 461 SUPERFAMILY Protein kinase-like (PK-like) 392 451 IPR011009 -
Rops4g00497 461 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 393 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00497 Rops-Chr4 13960352 13961737 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00497 1 393 Inorganic Solute Cotransporters AT1G70300 77.215 0.0 649
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Rops4g00497 K_trans 1.5e-133 CL0062
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00497 K03549 - gmx:100817411 714.916