Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00416 ATGGTAGGGGAATCAAGAAAGTGGGTGATACTCATAGCATCAATATGGATACAAGCATTCACAGGGACAAACTTTGATTTCTCATCATATTCATCTGATCTCAAATCTGTTCTTAACATAACTCAGCTTCAGCTGAATTATCTATCAGTGGCATCAGATATGGGAAAAGCATTTGGGTGGTGTTCTGGGGTGTCTCTCATGTATTTCCCATTGTGGGTGGTCATGTTCATTGCTTCTTTCTTGGGACTTGTTGGTTATGGCTTCCAATGGCTTGTCATTCAGAAAATCATCACTTTGCCTTATATTGTGGTCTTTCTTCTATGCTTGATTGCTGGATGTAGCATCTGCTGGTTCAACACCATCTGCTATGTCTTATGTATAAGACATTTCACACCAAACCGTTCACTTGCATTATCCTTGAGCATTAGTTTCAATGGTGTAAGTGCAGCTTTGTACACTCTCATTGCCAATGCAATAAACTCAGATGATGATTCTCTCTATCTCTTCCTCAATGCCCTTGTTCCTTTACTCATTTCCTTTATTGCACTCATCCCAATTCTCCACCAACCACAACCTCAACCTCATTCATTTGACACTGTTCAACGTGATTCCTTGGTTTTTCTTTGCCTCAATATCCTTGCACTTGTTACAGGCCTTTACCTTCTCTTCCTTTATTCACTCTCTTCAACTACTTCCATAGCTCGTGTTATCCTTGTTGGTGCCATGTTTCTACTTGTGTTGTTCTTATTCATACCTAGCATTGTGTATTCTAGAGATTGGTCTTGTTTCACTATCCCATCAAGTTTTTCCTTGTATGATTCAAGGTTCACTTTTGTTGACCCTAATGATGATCATGAGCTACATAAAGAACTCATTGGTGGTAATGAGGATAGTGCAAGGAATGGAAGTGCACAAGGTATGAGAGAGAAGAAATGTTGCTTTGTGAATGTGATGGAGAGAGAGCAACTTACAATGCTTGGTGAAGAGCATTCAATTAGGTTGCTAGTGCGTAGATGGGACTTTTGGTTATACTACATGGCATATTTTTGTGGAGGAACAATTGGGTTGGTTTATAGCAACAACTTGGGCCAAATTTCACAATCACTTGGACATAATTCTCAGACTAGTTCTCTTGTCACACTCTACTCCACATGTTCCTTCTTTGGTAGACTTCTTGCAGCTGCACCTGACTTCTTAAGTGGGAAGATACACTTTGCAAGAACTGGATGGTTTGCAGCAGCCCTAGTGCCAACACCCATTTCATTCATTTTACTAGCCATATCAGGCAGTGAAACAACATTACAAATAAGCACCAGCTTGATTGGCCTAAGTTCTGGCTTTGTGTTTTCAGCAGCAGTATCCATTACATCTGAGTTATTTGGTCCAAACAGTGTTGGTGTAAACCACAATATCCTCATCACCAACATCCCTTTAGGTTCATGCCTTTATGGTCTTCTTGCAGCTTTGATTTATGACTCCAATGCAATGAGTTCAAGTCACACAACAATATGGCTAAGAGAAATGTCCATGTGCATGGGAAGGAAATGTTACTTGCAAACATTTATTTGGTGGGGTTGCATTTCAATAGTGGGATTGGTTTCAAGCTTCTTGCTTTTCTTAAGGACTAGGATGGCTTATGGCAATTTTGAAAGAAATAAAAATGGAAACAGAACACAGACAACAGAGGTCCAGAATTAG 1698 0.3987 MVGESRKWVILIASIWIQAFTGTNFDFSSYSSDLKSVLNITQLQLNYLSVASDMGKAFGWCSGVSLMYFPLWVVMFIASFLGLVGYGFQWLVIQKIITLPYIVVFLLCLIAGCSICWFNTICYVLCIRHFTPNRSLALSLSISFNGVSAALYTLIANAINSDDDSLYLFLNALVPLLISFIALIPILHQPQPQPHSFDTVQRDSLVFLCLNILALVTGLYLLFLYSLSSTTSIARVILVGAMFLLVLFLFIPSIVYSRDWSCFTIPSSFSLYDSRFTFVDPNDDHELHKELIGGNEDSARNGSAQGMREKKCCFVNVMEREQLTMLGEEHSIRLLVRRWDFWLYYMAYFCGGTIGLVYSNNLGQISQSLGHNSQTSSLVTLYSTCSFFGRLLAAAPDFLSGKIHFARTGWFAAALVPTPISFILLAISGSETTLQISTSLIGLSSGFVFSAAVSITSELFGPNSVGVNHNILITNIPLGSCLYGLLAALIYDSNAMSSSHTTIWLREMSMCMGRKCYLQTFIWWGCISIVGLVSSFLLFLRTRMAYGNFERNKNGNRTQTTEVQN* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00416 565 Gene3D MFS general substrate transporter like domains 308 540 IPR036259 -
Rops4g00416 565 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 549 - -
Rops4g00416 565 Pfam Nodulin-like 7 255 IPR010658 -
Rops4g00416 565 SUPERFAMILY MFS general substrate transporter 7 543 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00416 Rops-Chr4 12355233 12362855 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00416 1 553 Nodulin-like Gene Family AT1G31470 56.216 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00416 - - gmx:100813947 907.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g00416 4 12355233 12362855 Rops4g00416 4 12355233 12362855 ECH