Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00388 ATGGCATCGAGCACAAAGCAAGCTTTGAGAAGGACAATGGAGATATATTCTAATTCTGTTTGTTTTGCTCTCGCTTGCAATACATCTCCTAAGATCATTGAACCGATTCGGAGCGTATGTGCCATTGTGCGGGTTTCACGCTTATCTGATCAAGAGATATCGGATCGCCTCATGGTTGTGGTTCAAGCAGAGAAGGATCATTTTCACCGCTGA 213 0.4413 MASSTKQALRRTMEIYSNSVCFALACNTSPKIIEPIRSVCAIVRVSRLSDQEISDRLMVVVQAEKDHFHR* 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00388 70 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Rops4g00388 70 Gene3D - 1 46 IPR027417 -
Rops4g00388 70 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 1 66 - -
Rops4g00388 70 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 66 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00388 Rops-Chr4 11686627 11686839 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00388 1 65 Core DNA Replication Machinery Family AT1G63160 73.846 2.67e-26 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00388 K10755 - qsu:111999495 98.2117