Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00370 ATGGAGAACAAGGCAACAATTCTGATGCAAAGGTATGAGCTTGGACGCTTGCTTGATCAAGGCAATTTTGCCAAAGTTTACCATGCTAGGAACTTGAAGACAGGCCAGAGTGTAGCCATCAAAGTCTTTAACAAAGAGATGGTCATGAGGGTTGGTTTGAAGGAGCAAATCAAGCACGAAATCTCTGTGATGCGTCTTGTGAGGCACCCCAACATTGTACAACTCTATGAGGTCATGGCAAGCAAAACAAAGATATATTTTGCAATGGAATATGTGAAAGGTGGTGAACTTTTTAATAAAGTGTCCCAAGGGAAGCTGAGGGAAAATCTGGCCAGAAAGTATTTCCAACAGCTGATTGATGCTGTTGGTCATTGCCACAGCAGAGGTGTTTATCACCGTGACCTCAAGCCAGAGAATCTTCTCTTGGATGAAAATGGGGACCTCAACGTTACAGACTTTGGTTTGAGTGCATTGTTAGAATCAAAGAAGAATGATGGCCTTCTTCACACAACATGTGGGACTCCAGCTTATGTAGCACCTGAGGTGATCAAGATGAAAGGATATGATGGAGCCAAGGCAGATATTTGGTCTTGTGGGGTGATTCTTTATGTTTTATTAGCAGGTTTTCTTCCTTTCAATGATAAAAATCTAATTGAAATGTATAGGAAGATTACAAGAGCAGATTTCAAGTTCCCACAATGGTTCCATTCAGATGTGAAAAGGCTTCTCTATAGAATCCTTGATCCCAATCCAAGGACAAGAATTAGTATTAACAAGATTATGCAAAGCCGTTGGTTTAGAAAGGGGTATAAGCAGATTGAAGCACCTCAGTTTCCACCACCCTTATCCCCTGATAATATCTCGGATGTTCAGGCTGCATTTGATTCATCAAGTTCAGATGATGGCTCAATATCAAACAATGAAGAATGCACCATGAAGCCATATTGTTTCAATGCATTTGATCTCATATCACTCTCTTCAGGACTTGATCTTTCTGGTCTGTTTGAGGAAGGAAAGGGTGAAAGACAAGAGGCAAGATTTACTACTAAAAAACCACCGTCAGCATTTGTGTCAAAACTTGAAGAGATAGCACAGATAGACAGTAGATTTAAGGTCATGAAGAAAATGGGGTTGTTAGATTGGAGGAAAGCAAGACAGGGTTACCAGGTCAACTCATTATAG 1182 0.4061 MENKATILMQRYELGRLLDQGNFAKVYHARNLKTGQSVAIKVFNKEMVMRVGLKEQIKHEISVMRLVRHPNIVQLYEVMASKTKIYFAMEYVKGGELFNKVSQGKLRENLARKYFQQLIDAVGHCHSRGVYHRDLKPENLLLDENGDLNVTDFGLSALLESKKNDGLLHTTCGTPAYVAPEVIKMKGYDGAKADIWSCGVILYVLLAGFLPFNDKNLIEMYRKITRADFKFPQWFHSDVKRLLYRILDPNPRTRISINKIMQSRWFRKGYKQIEAPQFPPPLSPDNISDVQAAFDSSSSDDGSISNNEECTMKPYCFNAFDLISLSSGLDLSGLFEEGKGERQEARFTTKKPPSAFVSKLEEIAQIDSRFKVMKKMGLLDWRKARQGYQVNSL* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00370 393 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g00370 393 CDD CIPK_C 318 377 - -
Rops4g00370 393 Gene3D Kinase associated domain 1, KA1 316 390 - -
Rops4g00370 393 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Rops4g00370 393 SUPERFAMILY Protein kinase-like (PK-like) 8 301 IPR011009 -
Rops4g00370 393 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g00370 393 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 4 384 - -
Rops4g00370 393 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g00370 393 Gene3D Transferase(Phosphotransferase) domain 1 2 315 - -
Rops4g00370 393 Pfam NAF domain 315 374 IPR004041 GO:0007165
Rops4g00370 393 ProSiteProfiles NAF domain profile. 312 336 IPR018451 GO:0007165
Rops4g00370 393 FunFam Non-specific serine/threonine protein kinase 5 310 - -
Rops4g00370 393 FunFam Non-specific serine/threonine protein kinase 3 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00370 Rops-Chr4 11152343 11153524 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00370 1 388 CBL-interacting serine-threonine protein kinases AT5G45820 65.903 0.0 521
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Rops4g00370 Pkinase 5.7e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00370 K07198 - gmx:100807927 577.015