Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00368 ATGAGGCTTGTGTTGCTATCAAAGAACAAACTCAGGTTCATTGATGGAAGTATCTTGGAGCCTGATCAAACAGATCCTTTGTTCTTGTTTGGGAACGATGCCTATGAAGTATGGAAAAACCTAGAAGACAGGTTCTCCCAAGGTGACATTTTCAGAATTTCTGAAATTCAAGAAGATCTTTGTAGGTTTCAACAAGGAATTTTATCAATTACAGAGTATTATACTCAATTTAAGTCGTTGTGGGAAGAATTGGAGAATTTAAGACCTACTCCTAAATGCACATGTGTGCCTGCATGTTCTTGTGATGCTTTGAAGAAATTTTCTATTTACAAGGAGCAAGACTGTGTTATCAGATTTTTGAAGGGGCTTAATGAGCAGTATTCCAATGTCAGGTCACAGATCATGCTTATTGATCCACTGCCATTGATCAATAAGGTGCCTCAGTGTGGAACACACGTCATAGGTGCCACTCGCCAGGAAAACTCATCATCTTCCTCTTCTCTTGCAATCCCTCCTTCAAATTCCATCAGCTCAGAAATCCCAAATCAATCATATGCCACCCATGGCAGTGGACAAATGGATTCAGTTGCCACCCCAGAGAACTCATCAATATCCATAGGGGATGATGATTTTGAGCAGAGTTCCCAAAAGTGTAAATCAGGTGGAGATGAATTTGATGAAGATGAACTTGATGCTAAAAGATGGAAAATTGAAGGTGAAAATGAGGGTATATCAGCACCTGGAAATAGAACAGTGAGAATACGAAGAGTTGTCGTTCAGACAACCAGCGAGTAG 795 0.4013 MRLVLLSKNKLRFIDGSILEPDQTDPLFLFGNDAYEVWKNLEDRFSQGDIFRISEIQEDLCRFQQGILSITEYYTQFKSLWEELENLRPTPKCTCVPACSCDALKKFSIYKEQDCVIRFLKGLNEQYSNVRSQIMLIDPLPLINKVPQCGTHVIGATRQENSSSSSSLAIPPSNSISSEIPNQSYATHGSGQMDSVATPENSSISIGDDDFEQSSQKCKSGGDEFDEDELDAKRWKIEGENEGISAPGNRTVRIRRVVVQTTSE* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00368 264 MobiDBLite consensus disorder prediction 157 211 - -
Rops4g00368 264 PANTHER GAG_PRE-INTEGRS DOMAIN-CONTAINING PROTEIN 37 179 - -
Rops4g00368 264 MobiDBLite consensus disorder prediction 157 229 - -
Rops4g00368 264 MobiDBLite consensus disorder prediction 212 229 - -
Rops4g00368 264 Pfam Retrotransposon gag protein 35 125 IPR005162 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00368 Rops-Chr4 11131478 11134134 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00368 177 264 WRKY Transcription Factor Family AT2G38470 41.573 1.18e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00368 - K13424 hbr:110639481 174.481