Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00361 ATGGAGAACAAGGCAACAATTACGATGCAAAGGTATGAGCTTGGACGCTTGCTTGATCAAGGCAATTTTGCCAAAGTTTACCATGCTAGGAACTTGAAGACGTGCCAGTACTTTGGTTTGAGTGCATTGTTAGAATCAAAGAAGAATGATGGCCTTCTTCACACAACATGTGGGACTCCAGCTTATGTAGCACCTGAGGTGATCAAGATGAAAGGATATGATGGAGCCAAGGCAGATATTTGGTCTTGTGGGGTGATTCTTTATGTTTTATTAGCAGGTTTTCTTCCTTTCAATGATAAAAATCTAATTGAAATGTATAGGAAGATTACAAGAGCAGATTTCAAGATCCCACAATGGTTCCATTCAGATGTGAAAAGGCTTCTCTATAGAATCCTTGATCCCAATCCAAGGACAAGAATTAGTATTAACAAGATTATGCAAAGCCGTTGGTTTAGAAAGGGGTATAAGCATATTGAAGCACCTCAGTTTCCACCACCCTTATCCCCTGATAATATCTCGGATGTTCAGGCTGCATTTGATTCATCAAGACTTGATCTTTCTGGTTTGTTTGAGGAAGGTAAGAGTGAAAGACAAGAGGCAAGATTTACTACTAAAAAACCACCTTCAGCATTTGTGTCAAAACTTGAAGAGATAGAACAGATAGACAGTAGATTTAAGGTCATGAAGAAAAATGGGGTTGTTAGATTGGAGGAAAGCAAGACAGGGTTACCAGGTCAACTCATTATAGATGCAGAAATTTTTGAAGTTACATCTTCCTTTCATATTGTTGAGGTGAAGAATATTGCTGGAGACACATTGGAATATAGGAAATTCTGGGACCAGTACTTCAAGCCTGCTCTAAATGAAATAGTATGGGCTTGGCAAGGATATGAGCAGCAGAAATTGTAG 909 0.3894 MENKATITMQRYELGRLLDQGNFAKVYHARNLKTCQYFGLSALLESKKNDGLLHTTCGTPAYVAPEVIKMKGYDGAKADIWSCGVILYVLLAGFLPFNDKNLIEMYRKITRADFKIPQWFHSDVKRLLYRILDPNPRTRISINKIMQSRWFRKGYKHIEAPQFPPPLSPDNISDVQAAFDSSRLDLSGLFEEGKSERQEARFTTKKPPSAFVSKLEEIEQIDSRFKVMKKNGVVRLEESKTGLPGQLIIDAEIFEVTSSFHIVEVKNIAGDTLEYRKFWDQYFKPALNEIVWAWQGYEQQKL* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00361 302 Pfam Protein kinase domain 38 151 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g00361 302 SMART serkin_6 12 151 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g00361 302 FunFam Non-specific serine/threonine protein kinase 175 292 - -
Rops4g00361 302 ProSiteProfiles Protein kinase domain profile. 1 151 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g00361 302 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 38 277 - -
Rops4g00361 302 SUPERFAMILY Protein kinase-like (PK-like) 38 179 IPR011009 -
Rops4g00361 302 Gene3D Kinase associated domain 1, KA1 177 293 - -
Rops4g00361 302 CDD CIPK_C 178 288 - -
Rops4g00361 302 Gene3D Transferase(Phosphotransferase) domain 1 17 158 - -
Rops4g00361 302 Pfam NAF domain 181 229 IPR004041 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00361 Rops-Chr4 10873995 10878371 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00361 1 47 CBL-interacting serine-threonine protein kinases AT5G45820 48.936 1.08e-08 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Rops4g00361 Pkinase 1.2e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00361 K07198 - cave:132169731 335.88