Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g00357 ATGGTTCTGAGTAGCAGGATTTTCAGTTCTCATGTTTTTGTTAATTTCTTGCTGCTGATCACTTGTGGCATGACTTATGGGACTGAGAGTGATATCTTGTGCTTGAGAAATATAAAAAATTCCCTTGAAGACCCCAATAATTATTTGCAGTCTTCTTGGAATTTCAACAATAACACTGAAGGGTTTATCTGCAGATTTAATGGGGTTGAATGTTGGCACCCTGATGAGAACAGAGTCTTGAATCTCAAACTGTCAAATATGGGACTCAAGGGCCAGTTTCCTCGTGGCATTATAAATTGCTCAAGCTTAACAGGATTAGATCTTTCAGTTAACAATCTCTCTGGAACCATTCCAGGAGATATATCTACTCTTCTACAATTTGTGACAACTCTTGATCTATCTTCAAATCAATTTTCTGGGGAGATACCTACAAGTCTTGCAAATTGTACCTATCTAAATAGCCTTAAGCTTGATCATAATCGACTCACTGGTCAAATTCCTCTCCAATTTAGCATTCTCTCACGAATTAAGACATTTACCGTATCCAACAATCTTTTGACAGGGCCAGTTCCAAACTTTCGCAATAGTGTTGAGGTAAGTTATGCAAATAATCAAGGCCTATGTGGTGGACTTTCATTGAGTCCTTGTGAGGCCAAGGCTTCTTCTAAGAGTAGTAACACTGCAGTTATAGCTGGAGCAGCTGTCGGAGGGGTAACTGTTGCAGCACTAGGATTGGGTATTGTAATGTCCTTCTTTGTGCGCCGTGTTTCTTACAGGAAGAAGGAAGAGGATCCGGAAGGAAACAAATGGGCAAGAAGTCTAAAAGGAACTAAAGCAATTAAGGTTTCTATGTTCGAGAAATCAGTTTCAAAAATGAAATTGAGTGATCTCATGAAGGCTACTAACAACTTCAGTAATACCAATATCATTGGGTCAGGAAGAACAGGAACTGTATACAGAGCTACCCTTGAAGATGGCACAACACTTATGGTCAAGAGATTGCAGGAATCTCAACACTCTGAGAAAGAATTTTTGTCTGAGATGGGGACACTGGGGACTGTCAAACATCGTAACCTGGTTCCTCTTTTAGGTTTTTGCATGGCCAAAAAGGAGAGGTTTGTGGTCTATAAAAACATGCCAAATGGTAACCTCCATGATCAACTACATCCTGCTGATGGTGGGATCACCCTTGAGTGGCCTTTGAGACTCAAAATTGCAATTGGAGCAGCCAAAGGATTGGCATGGCTTCATCATAGCTGCAATCCCCGCATTATCCACCGAAACATAAGCTCTAAGTGCATCTTGTTGGATGCAGATTTTGAGCCCAAAATTTCTGATTTTGGCCTTGCCAGATTGATGAACCCAATTGATACACATTTGAGTACTTTTGTAAATGGGGAGTTTGGGGATTTAGGTTATGTTGCTCCTGAGTACACAAAAACTTTGGTTGCTACACCTAAGGGGGATGTTTATAGCTTTGGGACTGTGCTTCTTGAGTTGGTGACTGGTGAAAGACCTACAAATGTGGCTAAAGCCCCGGAAACTTTCAAAGGAAATCTGGTAGAATGGATTACGGAGCTCTCAAGCAACTCACAACTCCAGGATGCCATTGATGAATCACTAGTTGGCAAGGGTGTTGATAATGAGCTTTTCCAATTTTTAAAAATTGCTTGCAACTGTGTTTTACCAACTGCTAAGGAGAGGCCCACGATGTTTGAAGTATATCAGCTTCTAAGAGCTGTTGGGGGTAGATACAATTTCACAACTGAGGATGAGATATTGGTACCTGAAGATATTGGTGATGCTAATAACTTGGAGGAACTTATTGTTTCTCGAGAATGA 1842 0.4072 MVLSSRIFSSHVFVNFLLLITCGMTYGTESDILCLRNIKNSLEDPNNYLQSSWNFNNNTEGFICRFNGVECWHPDENRVLNLKLSNMGLKGQFPRGIINCSSLTGLDLSVNNLSGTIPGDISTLLQFVTTLDLSSNQFSGEIPTSLANCTYLNSLKLDHNRLTGQIPLQFSILSRIKTFTVSNNLLTGPVPNFRNSVEVSYANNQGLCGGLSLSPCEAKASSKSSNTAVIAGAAVGGVTVAALGLGIVMSFFVRRVSYRKKEEDPEGNKWARSLKGTKAIKVSMFEKSVSKMKLSDLMKATNNFSNTNIIGSGRTGTVYRATLEDGTTLMVKRLQESQHSEKEFLSEMGTLGTVKHRNLVPLLGFCMAKKERFVVYKNMPNGNLHDQLHPADGGITLEWPLRLKIAIGAAKGLAWLHHSCNPRIIHRNISSKCILLDADFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYTKTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWITELSSNSQLQDAIDESLVGKGVDNELFQFLKIACNCVLPTAKERPTMFEVYQLLRAVGGRYNFTTEDEILVPEDIGDANNLEELIVSRE* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g00357 613 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 379 591 - -
Rops4g00357 613 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 47 193 - -
Rops4g00357 613 Gene3D Phosphorylase Kinase; domain 1 265 377 - -
Rops4g00357 613 SUPERFAMILY L domain-like 28 195 - -
Rops4g00357 613 Gene3D Transferase(Phosphotransferase) domain 1 379 593 - -
Rops4g00357 613 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 265 378 - -
Rops4g00357 613 CDD STKc_IRAK 310 578 - -
Rops4g00357 613 Pfam Protein tyrosine and serine/threonine kinase 307 576 IPR001245 GO:0004672|GO:0006468
Rops4g00357 613 ProSiteProfiles Protein kinase domain profile. 304 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g00357 613 SUPERFAMILY Protein kinase-like (PK-like) 282 578 IPR011009 -
Rops4g00357 613 Pfam Leucine rich repeat N-terminal domain 29 72 IPR013210 -
Rops4g00357 613 FunFam Nuclear pore complex protein NUP107 28 192 - -
Rops4g00357 613 Gene3D Ribonuclease Inhibitor 28 218 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g00357 Rops-Chr4 10713000 10715929 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g00357 13 592 Receptor kinase-like Gene Family AT3G28450 46.416 1.35e-177 515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Rops4g00357 PK_Tyr_Ser-Thr 2.9e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g00357 - - psat:127076602 991.875